Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A07f
         (448 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   0.75 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   9.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   9.3  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 171 FSKGPAATLRRSSGVKARPKCWS 103
           +S GP ATL+ S+       CWS
Sbjct: 20  WSSGPNATLQSSACTDDLSSCWS 42


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 197 GATVCSIP 174
           GAT+CSIP
Sbjct: 178 GATLCSIP 185


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 197 GATVCSIP 174
           GAT+CSIP
Sbjct: 178 GATLCSIP 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,338
Number of Sequences: 336
Number of extensions: 1780
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)