Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   0.71 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    24   0.71 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   0.71 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   0.71 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   3.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 320 RERVPSSSSLRINLTQIKMLLDLRHVPAWELRRSRITEQLLGST 451
           R R+  + SLR+   QIK+    R + A   + ++ TEQ + ST
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKA--KKDTKFTEQSVTST 252


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +2

Query: 323 ERVPSSSSLRINLTQIKMLLDLRHVPAWELRRSRITEQLLGSTVL 457
           ER   SSSLR+   Q+K+    R   A  L+ + + +  L +  L
Sbjct: 144 ERAEFSSSLRLTEPQVKIWFQNRRAKAKRLQEAELEKLRLSARPL 188


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 320 RERVPSSSSLRINLTQIKMLLDLRHVPAWELRRSRITEQLLGST 451
           R R+  + SLR+   QIK+    R + A   + ++ TEQ + ST
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKA--KKDTKFTEQSVTST 252


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +2

Query: 320 RERVPSSSSLRINLTQIKMLLDLRHVPAWELRRSRITEQLLGST 451
           R R+  + SLR+   QIK+    R + A   + ++ TEQ + ST
Sbjct: 211 RRRIEIAESLRLTERQIKIWFQNRRMKA--KKDTKFTEQSVTST 252


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 470 KAAGVEPLNPAVAPLYAIGG 411
           K A ++  NPA+  L+++GG
Sbjct: 82  KVAALKKTNPALKALFSLGG 101


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 95  SSTLRTKSATSPTPNPTCTSAIYHQT*PSKDST 193
           S  L  K + SPT  PT +     +  PSKD++
Sbjct: 84  SPILAEKVSVSPTTPPTPSPPPEERLTPSKDAS 116


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 288 NKTHERTMPNTGSGCRH 338
           NKTH + M   G+  RH
Sbjct: 142 NKTHSQPMQGVGNWERH 158


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 188  STLFSVLSVTSRIAACHKVSALF 256
            +T+F++++ TS     H V   F
Sbjct: 1220 ATIFTIITATSSFVTIHNVIGQF 1242


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 98  STLRTKSATSPTPNPT 145
           +TL TK  T P+  PT
Sbjct: 171 TTLTTKFTTKPSTKPT 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,836
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)