Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS302A06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 89 2e-18
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 53 1e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 53 1e-07
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 52 3e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 49 2e-06
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 47 9e-06
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 47 9e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 46 1e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 2e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 2e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 44 7e-05
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 43 1e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 43 1e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 43 1e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 43 1e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 43 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 42 4e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 42 4e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 42 4e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 40 0.001
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 40 0.001
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 40 0.001
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 39 0.002
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 39 0.002
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.006
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.006
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 37 0.010
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.010
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 35 0.031
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 35 0.031
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 35 0.031
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 35 0.041
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 34 0.054
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.094
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 33 0.094
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 33 0.094
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 33 0.094
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 33 0.094
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 33 0.094
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 33 0.094
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 33 0.094
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 33 0.094
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 32 0.29
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.38
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 31 0.38
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 30 0.87
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 30 0.87
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 30 0.87
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 30 0.87
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 30 1.2
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 29 1.5
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 29 1.5
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 29 1.5
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 1.5
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 1.5
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 1.5
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 1.5
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 29 2.0
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 2.0
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 2.0
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 28 3.5
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 27 6.2
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 27 6.2
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 27 6.2
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 6.2
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 27 8.1
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 27 8.1
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 27 8.1
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 27 8.1
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 27 8.1
AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical... 27 8.1
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 27 8.1
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 89.0 bits (211), Expect = 2e-18
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
V Y + EDA +A ++FNGL +Q KT+KVS+A + S+ SNLY+S +P MTL
Sbjct: 88 VNYVREEDALRAVSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTL 141
Query: 181 ERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKHMNGQCPIPGAGAV 336
L ++F PFG I SR+ S+G+GFV ++ + +A+ AIK +NG P + +
Sbjct: 142 HELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQI 201
Query: 337 IVKF 348
VKF
Sbjct: 202 TVKF 205
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +1
Query: 130 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAED 285
++++NL I+ LP MT E + +LF+ G I + ++ S G GFV Y + A
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 286 AIKHMNG 306
A+ NG
Sbjct: 99 AVSSFNG 105
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
VE+ H A +A N L+ + +KV++A+ + + ++++ +L ++
Sbjct: 89 VEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDN 148
Query: 181 ERLNTLFSPFGNI--------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
++L F PFG++ TN+ S+G GFV Y R++AE AI+ MNGQ
Sbjct: 149 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 199
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 130 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-----SQGIGFVCYETRQQAEDAIK 294
D LY+ NL +T + + TLF+ G++T ++V + FV + QA A++
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQ 102
Query: 295 HMN 303
MN
Sbjct: 103 TMN 105
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 52.8 bits (121), Expect = 1e-07
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
V +++ DAE+A N + GK +++ ++ +P + S N++I NL +
Sbjct: 78 VNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDN 133
Query: 181 ERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQCPIPGAGAVI 339
+ + FS FGNI + +V S+G GFV +ET + A++AI+ +NG + G +
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGML-LAGKKVFV 192
Query: 340 VKF 348
KF
Sbjct: 193 GKF 195
Score = 50.4 bits (115), Expect = 8e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVS-FALLNPENK-VSHKPDTESNLYISNLPPDM 174
V +E E A+ A NG+L+ GK + V F N+ + +N+Y+ N
Sbjct: 165 VHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHY 224
Query: 175 TLERLNTLFSPFGNITNSRV------SQGIGFVCYETRQQAEDAIKHMN 303
E L +F+ FGNIT+ V S+G GFV + ++AE A++ ++
Sbjct: 225 NKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ NL + + L F +GNIT+++V S+G GFVC+E ++A A+ M
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 301 NGQ 309
N +
Sbjct: 378 NSK 380
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 52.8 bits (121), Expect = 1e-07
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
V +++ DAE+A N + GK +++ ++ +P + S N++I NL +
Sbjct: 78 VNFQQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDN 133
Query: 181 ERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQCPIPGAGAVI 339
+ + FS FGNI + +V S+G GFV +ET + A++AI+ +NG + G +
Sbjct: 134 KSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGML-LAGKKVFV 192
Query: 340 VKF 348
KF
Sbjct: 193 GKF 195
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVS-FALLNPENK-VSHKPDTESNLYISNLPPDM 174
V +E E A+ A NG+L+ GK + V F N+ + +N+Y+ N
Sbjct: 165 VHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHY 224
Query: 175 TLERLNTLFSPFGNITNSRV------SQGIGFVCYETRQQAEDAIKHMN 303
E L LF+ FGNIT+ V S+G GFV + ++AE A++ ++
Sbjct: 225 NKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ NL + + L F +GNIT+++V S+G GFVC+E ++A A+ M
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 301 NGQ 309
N +
Sbjct: 378 NSK 380
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVS-FALLNPENK-VSHKPDTESNLYISNLPPDM 174
V +E E A+ A NG+L+ GK + V F N+ + +N+Y+ N
Sbjct: 102 VHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHY 161
Query: 175 TLERLNTLFSPFGNITNSRV------SQGIGFVCYETRQQAEDAIKHMN 303
E L LF+ FGNIT+ V S+G GFV + ++AE A++ ++
Sbjct: 162 NKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Score = 50.0 bits (114), Expect = 1e-06
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Frame = +1
Query: 22 DAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 201
DAE+A N + GK +++ ++ +P + S N++I NL + + + F
Sbjct: 22 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDNKSIYDTF 77
Query: 202 SPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQCPIPGAGAVIVKF 348
S FGNI + +V S+G GFV +ET + A++AI+ +NG + G + KF
Sbjct: 78 SLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGML-LAGKKVFVGKF 132
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ NL + + L F +GNIT+++V S+G GFVC+E ++A A+ M
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 301 NGQ 309
N +
Sbjct: 315 NSK 317
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 50.4 bits (115), Expect = 8e-07
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Frame = +1
Query: 49 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 228
N L+ + +KV++A+ + + ++++ +L ++ ++L F PFG+++++
Sbjct: 2 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 61
Query: 229 RV--------SQGIGFVCYETRQQAEDAIKHMNGQ 309
+V S+G GFV Y R++AE AI+ MNGQ
Sbjct: 62 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 96
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
VE+ EDA+ A N + + GK +KV+ A + +N D +N+++ NL P++
Sbjct: 59 VEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDE 113
Query: 181 ERLNTLFSPFGNI---------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+ L FS FG I +S S+G F+ + + + ++ A++ MNGQ
Sbjct: 114 KLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 48.8 bits (111), Expect = 2e-06
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
VE+ EDA+ A N + + GK +KV+ A + +N D +N+++ NL P++
Sbjct: 69 VEFMGEEDADYAIKILNMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDE 123
Query: 181 ERLNTLFSPFGNI---------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+ L FS FG I +S S+G F+ + + + ++ A++ MNGQ
Sbjct: 124 KLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 175
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
V +++ DAE+A N ++ G+ +++ ++ +P + + N++I NL +
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN----GNIFIKNLDRVIDN 158
Query: 181 ERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 306
+ + FS FGNI + +V S+G GFV +ET A+ AI+ +NG
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ N+ D+ + L FS FG IT+++V S+G GFVC+E ++A A+ M
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 301 NGQ 309
N +
Sbjct: 404 NSK 406
Score = 40.7 bits (91), Expect = 6e-04
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPE----NKVSHKPDTESNLYISNLPP 168
V +E A+ A NG+L+ K KV P ++ +N+++ N
Sbjct: 190 VHFETEHSAQTAIEKVNGMLLSDK--KVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGE 247
Query: 169 DMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMN 303
+ E+L+ +FS FG IT++ V +G GFV + + A A++ +N
Sbjct: 248 HLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Frame = +1
Query: 103 PENKVSHKPDTE---SNLYISNLPPDMTLERLNTLFSPFGNI--------TNSRVSQGIG 249
P + + P+ ++LYI +L PD++ L FS G + SR+S G
Sbjct: 42 PPTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYA 101
Query: 250 FVCYETRQQAEDAIKHMN 303
+V ++ AE A+ MN
Sbjct: 102 YVNFQQPADAERALDTMN 119
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 48.0 bits (109), Expect = 4e-06
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 180
V +++ DAE+A N ++ G+ +++ ++ +P + + N++I NL +
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN----GNIFIKNLDRVIDN 158
Query: 181 ERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 306
+ + FS FGNI + +V S+G GFV +ET A+ AI+ +NG
Sbjct: 159 KSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ N+ D+ + L FS FG IT+++V S+G GFVC+E ++A A+ M
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 301 NGQ 309
N +
Sbjct: 404 NSK 406
Score = 40.7 bits (91), Expect = 6e-04
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPE----NKVSHKPDTESNLYISNLPP 168
V +E A+ A NG+L+ K KV P ++ +N+++ N
Sbjct: 190 VHFETEHSAQTAIEKVNGMLLSDK--KVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGE 247
Query: 169 DMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMN 303
+ E+L+ +FS FG IT++ V +G GFV + + A A++ +N
Sbjct: 248 HLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 11/78 (14%)
Frame = +1
Query: 103 PENKVSHKPDTE---SNLYISNLPPDMTLERLNTLFSPFGNI--------TNSRVSQGIG 249
P + + P+ ++LYI +L PD++ L FS G + SR+S G
Sbjct: 42 PPTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYA 101
Query: 250 FVCYETRQQAEDAIKHMN 303
+V ++ AE A+ MN
Sbjct: 102 YVNFQQPADAERALDTMN 119
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Frame = +1
Query: 76 LKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV------- 234
+KV++A+ + + ++++ +L ++ ++L F PFG++++++V
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 235 -SQGIGFVCYETRQQAEDAIKHMNGQ 309
S+G GFV Y R++AE AI+ MNGQ
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQ 86
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/86 (29%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Frame = +1
Query: 76 LKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV------- 234
+KV++A+ + + ++++ +L ++ ++L F PFG++++++V
Sbjct: 82 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 141
Query: 235 -SQGIGFVCYETRQQAEDAIKHMNGQ 309
S+G GFV Y R++AE AI+ MNGQ
Sbjct: 142 KSKGYGFVSYPKREEAERAIEQMNGQ 167
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 130 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 46.8 bits (106), Expect = 9e-06
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Frame = +1
Query: 19 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTL 198
E + A AA +GL +G +++ K+ + +NLYI+NLP D T + L T
Sbjct: 156 ESPQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETE 207
Query: 199 FSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 306
+ FG + ++R+ S+G+GF +++++ E I +NG
Sbjct: 208 LNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
Score = 33.5 bits (73), Expect = 0.094
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 133 TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDA 288
+ +NLYI L P+ + L + S +GNI +++ +G GFV +E+ Q A A
Sbjct: 105 SSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
Query: 289 IKHMN 303
+ +N
Sbjct: 165 VDGLN 169
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 46.8 bits (106), Expect = 9e-06
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Frame = +1
Query: 19 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTL 198
E + A AA +GL +G +++ K+ + +NLYI+NLP D T + L T
Sbjct: 130 ESPQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETE 181
Query: 199 FSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 306
+ FG + ++R+ S+G+GF +++++ E I +NG
Sbjct: 182 LNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +1
Query: 127 PDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAE 282
P + +NLYI L P+ + L + S +GNI +++ +G GFV +E+ Q A
Sbjct: 77 PLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 136
Query: 283 DAIKHMN 303
A+ +N
Sbjct: 137 AAVDGLN 143
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPE-NKVSHKPDTESN--LYISNLPPD 171
VE+ H A A + NG + K + V++A E + KP+T + +++ +L +
Sbjct: 83 VEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSE 142
Query: 172 MTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKHMNG 306
+ +L F FG ++ +++ +G GFV Y R+ AE AI MNG
Sbjct: 143 IDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPE 108
V Y + EDAE+A NG + +T++ ++A P+
Sbjct: 178 VSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPD 213
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------NSRVSQGI 246
S A+ P+ S PD L++SN+P L T+F FG ++ N R S+G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 247 GFVCYETRQQAEDAIKHMNG 306
GFV E Q AE A + ++G
Sbjct: 195 GFVTMERPQDAERARQELHG 214
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------NSRVSQGI 246
S A+ P+ S PD L++SN+P L T+F FG ++ N R S+G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 247 GFVCYETRQQAEDAIKHMNG 306
GFV E Q AE A + ++G
Sbjct: 195 GFVTMERPQDAERARQELHG 214
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHM 300
NLY+ NL + + L F +GNIT+++V S+G GFVC+E ++A A+ M
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 301 NGQ 309
N +
Sbjct: 318 NSK 320
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV------SQGIGFVCYETRQQAEDAIKHM 300
+N+Y+ N E L LF+ FGNIT+ V S+G GFV + ++AE A++ +
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 301 N 303
+
Sbjct: 213 H 213
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 44.0 bits (99), Expect = 7e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 91 ALLNPENKVSH-KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-----SQGIGF 252
A+ N +N+ + P+ LYI NLP +T E + +F FG + RV ++G F
Sbjct: 2 AMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAF 61
Query: 253 VCYETRQQAEDAIKHMNG 306
V YE A+ A +H++G
Sbjct: 62 VVYEDIFDAKTACEHLSG 79
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 294
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 335 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 394
Query: 295 HMNG 306
MNG
Sbjct: 395 AMNG 398
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 294
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 295 HMNG 306
MNG
Sbjct: 559 AMNG 562
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 294
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 295 HMNG 306
MNG
Sbjct: 559 AMNG 562
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 294
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 428 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 487
Query: 295 HMNG 306
MNG
Sbjct: 488 AMNG 491
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 294
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 295 HMNG 306
MNG
Sbjct: 559 AMNG 562
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 297
++++ +L D++ E L + F+ FG ++ ++V S+G GFV + +Q AE+AI
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 298 MNGQ 309
MNG+
Sbjct: 196 MNGK 199
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 306
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 306
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 306
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES-- 141
VEYE E A A+ + NG ++ G+ LKV+ + P+N +P D +
Sbjct: 148 VEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKH 297
+Y+S++ PD++ L ++F FG I +++ +G G++ + +AI
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 298 MN 303
MN
Sbjct: 268 MN 269
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIK 294
S +Y+ ++ ++ + L F PFG I + +S + FV YE + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 295 HMNGQ 309
MNGQ
Sbjct: 162 SMNGQ 166
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES-- 141
VEYE E A A+ + NG ++ G+ LKV+ + P+N +P D +
Sbjct: 148 VEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKH 297
+Y+S++ PD++ L ++F FG I +++ +G G++ + +AI
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 298 MN 303
MN
Sbjct: 268 MN 269
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIK 294
S +Y+ ++ ++ + L F PFG I + +S + FV YE + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 295 HMNGQ 309
MNGQ
Sbjct: 162 SMNGQ 166
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES-- 141
VEYE E A A+ + NG ++ G+ LKV+ + P+N +P D +
Sbjct: 148 VEYEVPEAALLAQESMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKH 297
+Y+S++ PD++ L ++F FG I +++ +G G++ + +AI
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 298 MN 303
MN
Sbjct: 268 MN 269
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIK 294
S +Y+ ++ ++ + L F PFG I + +S + FV YE + A A +
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 295 HMNGQ 309
MNGQ
Sbjct: 162 SMNGQ 166
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVS-QGIGFVCYETRQQAEDAIKHMNGQ 309
L++ NLP ++ L LFSP G+I +S +G F+ +TR AE A + ++G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGR 173
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVS-QGIGFVCYETRQQAEDAIKHMNGQ 309
L++ NLP ++ L LFSP G+I +S +G F+ +TR AE A + ++G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGR 173
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 297
NL+I +LP + L +F+PFG+I +++V S+ GFV Y+ ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 298 MNG 306
MNG
Sbjct: 490 MNG 492
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 297
NL+I +LP + L +F+PFG+I +++V S+ GFV Y+ ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 298 MNG 306
MNG
Sbjct: 490 MNG 492
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 36.7 bits (81), Expect = 0.010
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
+YI LP + + F +G +++ + G GFV ++ ++ A+DA+ +NG+
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGK 58
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 67 GKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS----RV 234
G KV+FA P+ + SN+++ + DM L + FG IT+ V
Sbjct: 73 GLFTKVNFAKKEPK-PAENVMSNISNVFVRGISRDMPDTEL---YQAFGGITDGVVQCHV 128
Query: 235 SQGIGFVCYETRQQAEDAIKHMNGQ 309
+ G GFV ++TR A+ I M+G+
Sbjct: 129 ADGYGFVLFDTRANAQKKIVEMDGK 153
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 35.1 bits (77), Expect = 0.031
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQG-KTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMT 177
+E+ ++A + NG + G K ++ + N S+ P++E NL++S++P DM
Sbjct: 113 IEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFAND----SYNPNSEFNLHVSSVPDDMA 168
Query: 178 LERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMN 303
L +F + + +++ S+G GFV + + + A+ M+
Sbjct: 169 DAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMH 217
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 133 TESNLYISNLPPDMTLERLNTLFSPFGN------ITNSRVSQGIGFVCYETRQQAEDA 288
T++ +Y+SN+P + L +F +G +TN R S+G GFV ++ + E A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 133 TESNLYISNLPPDMTLERLNTLFSPFGN------ITNSRVSQGIGFVCYETRQQAEDA 288
T++ +Y+SN+P + L +F +G +TN R S+G GFV ++ + E A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.041
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = +1
Query: 151 ISNLPPDMTLERLNTLFSPFGNITN---------SRVSQGIGFVCYETRQQAEDAIKHMN 303
I NL ++ L +FS +G I N + V +G G+V Y+ + AE +IKHM+
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 304 G 306
G
Sbjct: 197 G 197
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 34.3 bits (75), Expect = 0.054
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Frame = +1
Query: 7 YEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDT---ESNLYISNLPPDMT 177
Y E+ +KA+ A + K + + +PE +V K T +S +++ N+ T
Sbjct: 636 YVVMENDQKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQAT 695
Query: 178 LERLNTLFSPFGNITNSR-------VSQGIGFVCYETRQQAEDAI 291
+ L LFS FG +T+ R +GI FV ++T A+ +
Sbjct: 696 DDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCV 740
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENK 114
V + +DA++ARA FNG ++G+ ++V+ A NK
Sbjct: 26 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENK 114
V + +DA++ARA FNG ++G+ ++V+ A NK
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Frame = +1
Query: 64 QGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------N 225
Q + L + N + S D L++SN+P L +F G + N
Sbjct: 75 QQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN 134
Query: 226 SRVSQGIGFVCYETRQQAEDAIKHMNG 306
R S+G GFV + A+ A NG
Sbjct: 135 ERGSKGFGFVTMQNPDDADRARAEFNG 161
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 58 LMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV- 234
++ GKT+ A+ + S + LY+S + D T + L F+ +G +T S +
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 146
Query: 235 -------SQGIGFVCYETRQQAEDAI 291
+G GFV ++ + +
Sbjct: 147 LDKATQKPRGFGFVTFDDHDSVDQCV 172
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENK 114
V + +DA++ARA FNG ++G+ ++V+ A NK
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
Score = 31.5 bits (68), Expect = 0.38
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Frame = +1
Query: 64 QGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------N 225
Q + L + N + S D L++SN+P L +F G + N
Sbjct: 75 QQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN 134
Query: 226 SRVSQGIGFVCYETRQQAEDAIKHMNG 306
R S+G GFV + A+ A NG
Sbjct: 135 ERGSKGFGFVTMQNPDDADRARAEFNG 161
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.5 bits (73), Expect = 0.094
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 309
LYI N+ +T E+LN LF + ++ + + F+ + R A++ NG+
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGK 433
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKHM 300
+Y+ ++P D+ + L LF G I + R+ S+G FV Y ++ A A K
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 301 NG 306
+G
Sbjct: 262 DG 263
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 58 LMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV- 234
++ GKT+ A+ + S + LY+S + D T + L F+ +G +T S +
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 108
Query: 235 -------SQGIGFVCYETRQQAEDAI 291
+G GFV ++ + +
Sbjct: 109 LDKATQKPRGFGFVTFDDHDSVDQCV 134
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 58 LMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV- 234
++ GKT+ A+ + S + LY+S + D T + L F+ +G +T S +
Sbjct: 49 IIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 108
Query: 235 -------SQGIGFVCYETRQQAEDAI 291
+G GFV ++ + +
Sbjct: 109 LDKATQKPRGFGFVTFDDHDSVDQCV 134
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 58 LMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV- 234
++ GKT+ A+ + S + LY+S + D T + L F+ +G +T S +
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 146
Query: 235 -------SQGIGFVCYETRQQAEDAI 291
+G GFV ++ + +
Sbjct: 147 LDKATQKPRGFGFVTFDDHDSVDQCV 172
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.5 bits (73), Expect = 0.094
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +1
Query: 58 LMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV- 234
++ GKT+ A+ + S + LY+S + D T + L F+ +G +T S +
Sbjct: 87 IIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEII 146
Query: 235 -------SQGIGFVCYETRQQAEDAI 291
+G GFV ++ + +
Sbjct: 147 LDKATQKPRGFGFVTFDDHDSVDQCV 172
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = +1
Query: 133 TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDA 288
++ ++++ N+ D++ + + ++FS GN+ + ++ +G GF+ + Q AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 289 IKHMNG 306
I+++NG
Sbjct: 76 IRNLNG 81
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 139 SNLYISNLPPDM-TLERLNTLFSPFGNI--TNSRVSQGIGFVCYETRQQAEDAIKHMNG 306
+ ++I N+ + T + + LF PFG I N QG GFV + A+++ + +NG
Sbjct: 83 ARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNG 141
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Frame = +1
Query: 103 PENKVSHKPDTESNLYISNLPPDMTLERLNT-----------LFSPFGNITNSRVSQ--- 240
P+N+ + +Y+ N+P D T + LN +FS G I + +++
Sbjct: 5 PQNRKRKRNVENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPP 64
Query: 241 GIGFVCYETRQQAEDAIKHMNGQ 309
G FV ++ A DA+K++NG+
Sbjct: 65 GFAFVTFKRTVHAFDAVKYLNGK 87
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYE 264
S L++ NLP ++ +L +F PF +T + + FV E
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYE 264
S L++ NLP ++ +L +F PF +T + + FV E
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 31.1 bits (67), Expect = 0.50
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +1
Query: 142 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 297
++Y+ N P T + L FS GN++N R+ +G FV + A+ A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 298 MNG 306
NG
Sbjct: 65 FNG 67
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -1
Query: 206 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 102
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 73 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 110
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -1
Query: 206 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 102
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 219 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 256
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 124 KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQG--IGFVCYETRQQAEDAIKH 297
K L++ L E L F FG + N G +V YE +++A +
Sbjct: 246 KSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRS 305
Query: 298 MNGQCPIPGAGAVIVKF 348
+ G C G ++V +
Sbjct: 306 LRGACISKGNHPIMVDY 322
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 124 KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQG--IGFVCYETRQQAEDAIKH 297
K L++ L E L F FG + N G +V YE +++A +
Sbjct: 246 KSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRS 305
Query: 298 MNGQCPIPGAGAVIVKF 348
+ G C G ++V +
Sbjct: 306 LRGACISKGNHPIMVDY 322
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Frame = +1
Query: 124 KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQG--IGFVCYETRQQAEDAIKH 297
K L++ L E L F FG + N G +V YE +++A +
Sbjct: 223 KSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDHGQPYAYVVYENTHTSQEACRS 282
Query: 298 MNGQCPIPGAGAVIVKF 348
+ G C G ++V +
Sbjct: 283 LRGACISKGNHPIMVDY 299
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENK-------VSHKPDTE-SNLYIS 156
V++ DA+ A G L+ G +L++ + +K V K E + L +
Sbjct: 694 VQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTKLLVR 753
Query: 157 NLPPDMTLERLNTLFSPFGNITNSRVSQGIG 249
NLP + +++ + TLF FG + R+ + G
Sbjct: 754 NLPFEASVKEVETLFETFGAVKTIRIPKKPG 784
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNIT--------NSRVSQGIGFVCYETRQQAEDAIKHM 300
LY+ D+T + L F PFG++ S +G GFV ++ + A AI +M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 301 N 303
N
Sbjct: 73 N 73
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKP 129
VE++ EDA A N + GKT++V+FA + S KP
Sbjct: 57 VEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 237
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 238 QGIGFVCYETRQQAEDAIKHMNG 306
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 93
+ + +DAE+ARAA G ++G+ + V +A
Sbjct: 424 IRFATFQDAERARAALYGSTVEGRMISVDYA 454
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 237
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 238 QGIGFVCYETRQQAEDAIKHMNG 306
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 237
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 238 QGIGFVCYETRQQAEDAIKHMNG 306
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 85 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 237
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 238 QGIGFVCYETRQQAEDAIKHMNG 306
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 130 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGF 252
L++ NLP ++ L LFSP G+I +S G GF
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-GKGF 152
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSF 90
VE+E H DAE A A +G G+ ++V F
Sbjct: 51 VEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 1 VEYEKHEDAEKARAAFNGLLMQGKTLKVSF 90
VE+E H DAE A A +G G+ ++V F
Sbjct: 51 VEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 498 ERCTNISTVESCRRRTVEPSSCSVIRDRRSSHAGTCRRSRSIF-ICVRFIRKLD 340
+ C +T+ES TV S+C VIR R S+ G + I FI K+D
Sbjct: 62 KHCRTDATLESQVNLTVSYSACDVIRQRSSNPKGIMMTATIIISFHPMFITKID 115
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 139 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
+NL+I +LP D L F+PFG I +++V
Sbjct: 76 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 145 LYISNLPPDM-TLERLNTLFSPFGNITNSRV 234
L ++ +PP+M T+ +LN F+ FG + N +V
Sbjct: 368 LQVAKIPPEMNTIAKLNEHFATFGTVDNIQV 398
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 106 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 240
+N+ +K + NL SNL D +E+LN L N+R+ +
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 106 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 240
+N+ +K + NL SNL D +E+LN L N+R+ +
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 311 AQYRERVPSSSSLRINLTQIKMLLDLRHVPAWELRRSRITEQLLGSTVLRLQLSTVLILV 490
A+ R+ V NLT K+LL +PA + + ++E+L L ++L L+ +
Sbjct: 124 AEERQTVEQLKEAIKNLTDEKVLLCQETIPAISNKVTSLSEELENCQTLNVELEDRLLSI 183
Query: 491 QRSERALMPL 520
A++ +
Sbjct: 184 TSESEAILKI 193
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
E+ L++ L P T E L +FS FG I N +
Sbjct: 240 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
E+ L++ L P T E L +FS FG I N +
Sbjct: 240 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 272
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 136 ESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 234
E+ L++ L P T E L +FS FG I N +
Sbjct: 171 ENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEI 203
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSR---VSQGIGFVCYETRQQAEDA 288
L+ SN+P E++ T+FS F + R ++ F+ YE+ +E A
Sbjct: 145 LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPA 195
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 95 SSTLRTKSATSPTPNPTCTSAIYHQT*PSKDSTL 196
S++++TK+ TSPT +PT T+ T S S++
Sbjct: 662 STSVQTKTTTSPTKSPTSTTITTSGTTTSATSSV 695
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +1
Query: 115 VSHKP--DTES-NLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 240
V ++P D E+ +Y+ NLP + E+L L S +G + R+S+
Sbjct: 808 VKYRPIYDREAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRISK 852
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +1
Query: 145 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQCPIP 321
+++ N+PPD+ L L +G ++N + +G E ++A A ++G +P
Sbjct: 123 VHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEEA-SAAAFVSGMTAVP 180
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 424 YNGATAGFNGST-PAAFNGTNISAAFG 501
Y GA++GF GST + F S+AFG
Sbjct: 94 YGGASSGFGGSTATSGFGSGEKSSAFG 120
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 424 YNGATAGFNGST-PAAFNGTNISAAFG 501
Y GA++GF GST + F S+AFG
Sbjct: 94 YGGASSGFGGSTATSGFGSGEKSSAFG 120
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 107 RTKSATSPTPNPTCTSAIYHQT*PSKDSTLFSVLSVTSRIAACHKVSALFATRPGNRP 280
R S+ P P+PT ++ T PS S F+ + T IA+ + +F+TR +RP
Sbjct: 9 RILSSPYPCPSPTISTPA---TSPSSISPTFASPNGTPNIASSMYPAWVFSTRYSDRP 63
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +2
Query: 107 RTKSATSPTPNPTCTSAIYHQT*PSKDSTLFSVLSVTSRIAACHKVSALFATRPGNRP 280
R S+ P P+PT ++ T PS S F+ + T IA+ + +F+TR +RP
Sbjct: 9 RILSSPYPCPSPTISTPA---TSPSSISPTFASPNGTPNIASSMYPAWVFSTRYSDRP 63
>AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical
protein Y105E8A.21 protein.
Length = 934
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 106 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVS-QGIGFVCYETR 270
E++V PD N+++ PD+TL + +P N+ V +G V TR
Sbjct: 557 ESRVPEAPDRGDNVHVIVADPDLTLRLPKSTDTPDDTFLNADVKMEGDDIVVLPTR 612
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 424 YNGATAGFNGST-PAAFNGTNISAAFG 501
Y GA++GF GST + F S+AFG
Sbjct: 94 YGGASSGFGGSTATSGFGSGEKSSAFG 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.132 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,782,666
Number of Sequences: 27780
Number of extensions: 251894
Number of successful extensions: 1032
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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