Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS302A02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    51   7e-09
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.54 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.2  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 50.8 bits (116), Expect = 7e-09
 Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
 Frame = +1

Query: 97  TELYLKNNSISIVKKNAFQNQITLITLDLSDNKIIQIEQYS-LPLKKIQYLLLSGNFIGG 273
           TE+Y   NS+  V+++ F + I L  + L DN+I  +E+ + + LK ++ L L GN I  
Sbjct: 95  TEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKI-A 153

Query: 274 VIKNNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLA--RLNLSHNQI 414
            I   TF     L  L+L+  +I+++D   F  +  L    +N+SHN++
Sbjct: 154 TIAYETFQNLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKL 202



 Score = 46.8 bits (106), Expect = 1e-07
 Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
 Frame = +1

Query: 100 ELYLKNNSISIVKKNAFQNQI--TLITLDLSDNKIIQIEQYSLP-LKKIQYLLLSGNFIG 270
           +++L++N+I ++ +  FQ  I   L  +  S N +  ++Q++   L +++ + L  N I 
Sbjct: 70  KVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIE 129

Query: 271 GVIKNNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNLSHNQIDXFXPNNF 438
             ++   F   K L+ LNL    I T+    F +LP L  L+L++N I     N F
Sbjct: 130 S-LERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDFNIF 184



 Score = 45.6 bits (103), Expect = 3e-07
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = +1

Query: 100 ELYLKNNSISIVKKNAFQNQITLITLDLSDNKIIQIEQYSL-PLKKIQYLLLSGNFIGGV 276
           +LYL +N +    K+ F N   L  LDLS N + +++  +    KK+Q+L  S N I   
Sbjct: 252 QLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRI-SE 310

Query: 277 IKNNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNLSHN 408
           I N+ F     LR ++ S+  + ++ D  F +   L RL++SHN
Sbjct: 311 IPNDLFRFLGNLRIVDFSHNRLRSLPDNLFRETG-LERLDVSHN 353



 Score = 44.0 bits (99), Expect = 8e-07
 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
 Frame = +1

Query: 115 NNSISIVKKNAFQNQITLITLDLSDNKIIQIEQYSLPLKKIQYLL---LSGNFIGGVIKN 285
           +N +  +  N F+ +  L  LD+S N + ++   SL L   Q L    LS N I  +   
Sbjct: 329 HNRLRSLPDNLFR-ETGLERLDVSHNLLGKLPLTSLSLASAQTLSELDLSWNSISSLSHG 387

Query: 286 NTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNLSHNQIDXFXPN--NFQGMENCI 459
              +  K L +L+LS   +  +D   F  +P LA LNL HN       N  +FQG+E  +
Sbjct: 388 GQLARFKCLSWLDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTL 447

Query: 460 VWIYLAXXSIPLV 498
           + + L   S+  V
Sbjct: 448 LHLNLDNVSLSQV 460



 Score = 41.1 bits (92), Expect = 6e-06
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
 Frame = +1

Query: 100 ELYLKNNSISIVKKNAFQNQITLITLDLSDNKIIQIEQYSLP---LKKIQYLLLSGNFIG 270
           EL L NN +  V  N+F    +L  + L DN I  I + +      + +  +  S N + 
Sbjct: 46  ELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVR 105

Query: 271 GVIKNNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNLSHNQIDXFXPNNFQGM 447
            V + +TF+    L  ++L +  I +++  AF +L  L RLNL  N+I       FQ +
Sbjct: 106 NV-QQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNL 163



 Score = 37.9 bits (84), Expect = 5e-05
 Identities = 27/99 (27%), Positives = 45/99 (45%)
 Frame = +1

Query: 103 LYLKNNSISIVKKNAFQNQITLITLDLSDNKIIQIEQYSLPLKKIQYLLLSGNFIGGVIK 282
           L L  NS+  V      N  +L  L+L  N +  +   +  L ++++L L GN I  +  
Sbjct: 471 LSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAVPIVTHSLTELRHLSLEGNPITTLSN 530

Query: 283 NNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNL 399
            +    A  L  LNL N ++T ++  AF  +  L  L +
Sbjct: 531 TSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKI 569



 Score = 35.9 bits (79), Expect = 2e-04
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +1

Query: 103 LYLKNNSISIVKKNAFQN-QITLITLDLSDNKIIQIEQYSLP-LKKIQYLLLSGNFIGGV 276
           L L  N+I+ V K  F+  +++L+ L L  NK++   +     +  +Q L LS N +   
Sbjct: 228 LDLSFNNITSVAKQFFRPVELSLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYE- 286

Query: 277 IKNNTFSGAKYLRFLNLSNFNITTVDDMAFXDLPVLARLNLSHNQIDXFXPNNFQ 441
           +  +TF   K L++L+ S+  I+ + +  F  L  L  ++ SHN++     N F+
Sbjct: 287 LDFDTFRNTKKLQWLDTSHNRISEIPNDLFRFLGNLRIVDFSHNRLRSLPDNLFR 341



 Score = 29.9 bits (64), Expect = 0.014
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 310 LRFLNLSNFNITTVDDMAFXDLPVLARLNLSHNQIDXFXPNNFQG-MENCIVWIYLAXXS 486
           L  L+LSN  +  V D +F  L  L +++L  N I+      FQG +   +  +Y +  S
Sbjct: 44  LEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNS 103

Query: 487 I 489
           +
Sbjct: 104 V 104


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 287 LFFMTPPMKFPDSNKY*IFFNGKEYCSICIILLSDKSKVISVIW--FW 150
           +FF+TP   FP + KY   +     C  C+++      V+ ++W  +W
Sbjct: 24  IFFITPWYDFPTNQKY---YPSLAKCYACLLM------VVKILWVIYW 62


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
 Frame = +1

Query: 226 LKKIQYLLL---SGNFIGGVIKNNTFSGAKYLRFLN-LSNFNI 342
           L K+  LL+   +  ++G V  N + +G K++ F+N L  F++
Sbjct: 72  LLKVSSLLIGFCASIYVGTVWINTSINGTKFIEFINKLIEFDV 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,805
Number of Sequences: 336
Number of extensions: 2002
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)