Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H11f
         (366 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...   179   9e-48
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   1.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   3.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   3.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.2  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score =  179 bits (435), Expect = 9e-48
 Identities = 89/98 (90%), Positives = 94/98 (95%)
 Frame = +1

Query: 70  MAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTET 249
           MAASDS  D+SLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERT+SELIPFLTET
Sbjct: 1   MAASDSAGDDSLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTRSELIPFLTET 60

Query: 250 IYDEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETL 363
           IYDEDEVLLALAEQLGSFI LVGG E+A+CLLPPLE+L
Sbjct: 61  IYDEDEVLLALAEQLGSFITLVGGPEYAYCLLPPLESL 98



 Score = 33.1 bits (72), Expect = 0.001
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +1

Query: 91  TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYD 258
           T E L P+   + +LK+E  ++RLN I  L  +   +G+++    L+P + E   D
Sbjct: 363 TIEHLLPL--FLTQLKDECPEVRLNIISNLDCVNEVIGIQQLSQSLLPAIVELAED 416


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 46  QDKAQ*IKMAASDSGTDESLY 108
           Q  ++ IKM  ++SG D S+Y
Sbjct: 264 QSLSRWIKMVLAESGVDTSIY 284


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 43 FNSKYTHSNFND 8
          F  KY H N ND
Sbjct: 60 FTGKYCHENIND 71



 Score = 21.4 bits (43), Expect = 3.0
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 360 CLQGWKKTMCELSSADQVDETT 295
           C  GWK   C L  +   D TT
Sbjct: 132 CKNGWKGKTCSLKDS-HCDHTT 152


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 244 ETIYDEDEVLLALAE 288
           E IY ED+VLL  +E
Sbjct: 17  EMIYREDDVLLVKSE 31


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = +1

Query: 256 DEDEVLLALAEQLGSFINLVGGGEFAH 336
           D DEVL  L +     ++L    E  H
Sbjct: 341 DNDEVLQVLEDIYSDLLDLTDNNELFH 367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,995
Number of Sequences: 336
Number of extensions: 1107
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7510735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)