Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H11f
(366 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44) 49 1e-06
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 39 0.001
SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16) 28 2.0
SB_46271| Best HMM Match : DUF479 (HMM E-Value=2.2) 28 2.7
SB_15487| Best HMM Match : DUF479 (HMM E-Value=2.2) 28 2.7
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) 27 3.5
SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.7
SB_55456| Best HMM Match : Cadherin (HMM E-Value=0) 27 4.7
SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0) 27 6.2
SB_22363| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.1
SB_54023| Best HMM Match : F5_F8_type_C (HMM E-Value=0.051) 26 8.1
>SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)
Length = 405
Score = 48.8 bits (111), Expect = 1e-06
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 70 MAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFL 240
MA+SD D+SLYPIAVLIDEL+NEDVQ +++ L I+ L + ++ +P L
Sbjct: 1 MASSDG--DDSLYPIAVLIDELRNEDVQ----AVESLRLISADLSTQDLENHFVPLL 51
Score = 33.1 bits (72), Expect = 0.071
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 91 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-E 267
T E L P+ + + LK+E ++RLN I L + +GV + L+P + E D
Sbjct: 270 TIEHLLPLFLTM--LKDEFPEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWR 327
Query: 268 VLLALAEQL 294
V LA+ E +
Sbjct: 328 VRLAIIEYM 336
>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
Length = 722
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 145 DVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQLGSFINLVGG 321
D ++R ++L +IA ALG E TK+ +IP L E DE+ V L+ E + + +NL+
Sbjct: 12 DYEVRACMCQELESIARALGTETTKTSVIPELVELTNDEETSVRLSGMETITNLLNLLDD 71
Query: 322 GEF 330
F
Sbjct: 72 VNF 74
>SB_31205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1528
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 145 DVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYD 258
DV L L+++KK++ I + VE K + P ++ +YD
Sbjct: 716 DVTLSLDNLKKMALIIASRAVEEFKKIVSPRFSKPLYD 753
>SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16)
Length = 425
Score = 28.3 bits (60), Expect = 2.0
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +1
Query: 130 ELKNEDVQLRLNSIKKLSTIALA--LGVERTKSELIPFLTETIYDEDEVL 273
EL D+Q ++ S LA LG + TK+EL+P + D DE+L
Sbjct: 55 ELLASDMQWKVRRTLAFSIHELAQVLGEDLTKTELVPTFNSFLKDLDELL 104
>SB_46271| Best HMM Match : DUF479 (HMM E-Value=2.2)
Length = 454
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 112 SDTMIHPSRSRSLPFLSIELCLDFNSKYTHSNF-NDNF 2
SDT +HPS S PF+ F + Y +SN DNF
Sbjct: 230 SDTRMHPSSSHPKPFV---FHPSFQNMYVYSNITEDNF 264
>SB_15487| Best HMM Match : DUF479 (HMM E-Value=2.2)
Length = 508
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 112 SDTMIHPSRSRSLPFLSIELCLDFNSKYTHSNF-NDNF 2
SDT +HPS S PF+ F + Y +SN DNF
Sbjct: 230 SDTRMHPSSSHPKPFV---FHPSFQNMYVYSNITEDNF 264
>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
Length = 426
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 151 QLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQL 294
++RLN I L + +GV + L+P + E D V LA+ E +
Sbjct: 3 EVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAIIEYM 51
>SB_50369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +1
Query: 115 AVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQ 291
A ++++L+ D+++ L ++K A+G E K +LI F+T+ E L LA Q
Sbjct: 141 ATILNQLEQIDLKVELEKLQK----GQAIGDEHHKRQLIDFITDQRQLLAECLYGLACQ 195
>SB_55456| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 736
Score = 27.1 bits (57), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 139 NEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIY 255
NE+ + + I+ ST+ L LG+E ++ P TE Y
Sbjct: 40 NENATIGIQGIRNDSTLFLFLGIEDDYNDNAPVFTEQPY 78
>SB_12332| Best HMM Match : PI-PLC-X (HMM E-Value=0)
Length = 1038
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 160 NEAVHPHSSAHL*ERQSDTMIHPSRSRSLP 71
N HP SS +L + QSDT PS+ +SLP
Sbjct: 452 NSLRHPMSSRYLIQIQSDT---PSKVKSLP 478
>SB_22363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 9 SLKFECVYFELKSRQSSIDKNGSE-RLRDG*IIVSDCRSH 125
S+ VYFE+K Q+ D++ +E +RD +S C H
Sbjct: 12 SIDLHNVYFEIKENQAVPDQSLTEIEVRDDVECISACTKH 51
>SB_54023| Best HMM Match : F5_F8_type_C (HMM E-Value=0.051)
Length = 241
Score = 26.2 bits (55), Expect = 8.1
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +1
Query: 88 GTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALG----VERTKSELIPFLTETIY 255
G D L + +ID L E V+ RL + ST + T+ LIP TE I
Sbjct: 107 GVDIGLKSVLRVIDPL--ETVRDRLTAAVPFSTWMNLRDSPSTILATEIPLIPMTTEGIT 164
Query: 256 DEDEVLLALAEQLGSFINLVGGG 324
DE LAL L NL GGG
Sbjct: 165 DEPLPPLALTSTLN---NLRGGG 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,291,420
Number of Sequences: 59808
Number of extensions: 142191
Number of successful extensions: 344
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 582596255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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