Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H11f
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a ... 149 5e-37
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 3.1
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 27 4.1
U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,... 27 5.4
U23516-8|AAG38879.1| 167|Caenorhabditis elegans Hypothetical pr... 26 7.2
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 26 7.2
U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical pr... 26 9.5
U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical p... 26 9.5
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 26 9.5
>U23514-5|AAC46541.2| 590|Caenorhabditis elegans Phosphatase 2a
regulatory a subunitprotein 1 protein.
Length = 590
Score = 149 bits (362), Expect = 5e-37
Identities = 73/98 (74%), Positives = 84/98 (85%)
Frame = +1
Query: 70 MAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTET 249
M+ + TD++LYPIAVLIDEL+NEDV LRLNSI+KLSTIALALGVERT++ELI FLT+T
Sbjct: 1 MSVVEEATDDALYPIAVLIDELRNEDVTLRLNSIRKLSTIALALGVERTRNELIQFLTDT 60
Query: 250 IYDEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETL 363
IYDEDEVLL LAEQLG+F LVGG + HCLL PLE L
Sbjct: 61 IYDEDEVLLVLAEQLGNFTPLVGGPDHVHCLLLPLENL 98
Score = 27.1 bits (57), Expect = 4.1
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 91 TDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYD-EDE 267
T L PI + + L ++ ++RLN I L + +G + + L+P + D +
Sbjct: 363 TVSELLPIYMQL--LNDQTPEVRLNIISSLDKVNEVIGAAQLSTSLLPAIVGLAEDGKWR 420
Query: 268 VLLALAEQLGSFINLVGGGEFAHCLLP 348
V LA+ + + + +G F LLP
Sbjct: 421 VRLAIVQFMPLLASQLGQEFFDEKLLP 447
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 67 KMAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIK-------KLSTIALALGVERTKSE 225
++ +S+ S YPIA + + LKNE++Q ++K KL+ L + R K
Sbjct: 235 RVISSEELEASSSYPIASMKNCLKNEEIQKMQKALKEKDEQISKLTEQLQGLLINRDKET 294
Query: 226 LIPFLTETIYDED 264
+ L + YD D
Sbjct: 295 KVEDLQQFEYDGD 307
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 27.1 bits (57), Expect = 4.1
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Frame = +1
Query: 118 VLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELI-------PFLTETIYDEDEVLL 276
V+I LK+ED L+ ++++ L +A L V +LI PFL E + + ++L
Sbjct: 472 VIILSLKSEDTSLQSSAVRGLPHVAEYLPVGFITKKLIPAIMGLPPFLHENVPRQLDLLA 531
Query: 277 ALA 285
ALA
Sbjct: 532 ALA 534
>U39997-2|AAK68388.1| 378|Caenorhabditis elegans Dehydrogenases,
short chain protein5 protein.
Length = 378
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 304 INLVGGGEFAHCLLPPLE 357
+N +G EF C+LPP+E
Sbjct: 196 VNGMGAAEFLSCVLPPME 213
>U23516-8|AAG38879.1| 167|Caenorhabditis elegans Hypothetical
protein B0416.2 protein.
Length = 167
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -1
Query: 222 RFSPLHAQSQRDRRQLLYRVQTKLYILILQLIYENGN 112
+FS H Q + R + V+ +YI +YEN N
Sbjct: 87 KFSKTHVQCLEEDRPSCHGVKDDMYISECVTVYENAN 123
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 94 DESLYPIAVLIDELKNEDVQLRLNSIKKL 180
D++L I VL+D LK D+Q + S+K +
Sbjct: 3506 DKALDQIQVLVDVLKQCDIQAVVKSLKSI 3534
>U70855-5|AAB09160.2| 886|Caenorhabditis elegans Hypothetical
protein K08F11.2 protein.
Length = 886
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 121 ERQSDTMIHPSRSRSLPFLSIELCLDFNSK 32
+R D I P R R PF+ + LD SK
Sbjct: 53 DRNGDAQITPERRRVSPFVDFDDNLDVESK 82
>U55857-10|AAA98035.2| 895|Caenorhabditis elegans Hypothetical
protein K08D10.1 protein.
Length = 895
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 121 ERQSDTMIHPSRSRSLPFLSIELCLDFNSK 32
+R D I P R R PF+ + LD SK
Sbjct: 53 DRNGDAQITPERRRVSPFVDFDDNLDVESK 82
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 121 ERQSDTMIHPSRSRSLPFLSIELCLDFNSK 32
+R D I P R R PF+ + LD SK
Sbjct: 53 DRNGDAQITPERRRVSPFVDFDDNLDVESK 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,991,829
Number of Sequences: 27780
Number of extensions: 108812
Number of successful extensions: 361
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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