Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H11f
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   3.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    20   8.0  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              20   8.0  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 273 ENLVFIIDCLSEERDQLRFSPLHAQSQRDRRQLLYRVQTKLYIL 142
           EN++ I+D L +E +QL      A + +D +   Y  + K+Y L
Sbjct: 373 ENVLAIVDRLMDETNQLTLQET-ADAFKDLQDKYYE-EYKMYEL 414


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 320 PPTKLMKLP 294
           P TKLMKLP
Sbjct: 150 PDTKLMKLP 158


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 320 PPTKLMKLP 294
           P TKLMKLP
Sbjct: 150 PDTKLMKLP 158


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 19  LSAYTLN*NQDKAQ*IKMAASDSGTDESLYPIAV 120
           LS++TLN N DK    +   +    D  +Y +A+
Sbjct: 224 LSSHTLNHNSDKMSDQQENLTLKEVDNKVYGMAL 257


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 51  QSSIDKNGSERLRDG*IIVSD 113
           ++SID+   +  RDG I V D
Sbjct: 36  ETSIDQQKEDDFRDGNIDVED 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,434
Number of Sequences: 438
Number of extensions: 1392
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)