Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H09f
         (386 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    21   4.9  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    21   4.9  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   4.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   4.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   4.9  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   4.9  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   4.9  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   4.9  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   4.9  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   4.9  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   4.9  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   4.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.9  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   8.6  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 101 NYNKKLYYNI 110


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 101 NYNKKLYYNI 110


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 103 NYNKKLYYNI 112


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 107 NYNKKLYYNI 116


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 107 NYNKKLYYNI 116


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 103 NYNKKLYYNI 112


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 103 NYNKKLYYNI 112


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 103 NYNKKLYYNI 112


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 103 NYNKKLYYNI 112


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 327 NYNKKLYYNI 336


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 331 NYNKKLYYNI 340


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 226 DYNVKVYYNI 255
           +YN K+YYNI
Sbjct: 339 NYNKKLYYNI 348


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 100  CQTQVDIQKSSNPIKVMLDYVLASVNAYFP 11
            CQT+ D+  S   IKV++    A   ++ P
Sbjct: 1207 CQTEEDVPGSPADIKVVVSSPQALFISWLP 1236


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 100  CQTQVDIQKSSNPIKVMLDYVLASVNAYFP 11
            CQT+ D+  S   IKV++    A   ++ P
Sbjct: 1203 CQTEEDVPGSPADIKVVVSSPQALFISWLP 1232


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -2

Query: 136 NYRHNRFKYKQSCQTQVDIQKSSNPIKV 53
           N R+N   Y  S  + + + ++ NP+ +
Sbjct: 523 NKRNNAKIYTSSVNSNLTVNQTVNPVAI 550


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,574
Number of Sequences: 438
Number of extensions: 2634
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)