Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H07f
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   5.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   9.2  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 368 GVRDSNGNELPSVPEMRKKFD 430
           G  +   N +  + EMRK+FD
Sbjct: 149 GAYNDKSNYVTLIKEMRKEFD 169


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 11/47 (23%), Positives = 18/47 (38%)
 Frame = +2

Query: 263 ARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLTNGVRDSNGNELPS 403
           +    +G  S   +        P +   K NS+T  +  S G  LP+
Sbjct: 8   SNEDTLGARSPGGDHSENMQDEPENLSNKSNSITVPLSISTGQRLPA 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,924
Number of Sequences: 336
Number of extensions: 1551
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)