Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H07f
(445 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical pr... 33 0.093
Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical pr... 28 2.7
AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical ... 28 2.7
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 28 3.5
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 28 3.5
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 28 3.5
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 27 4.6
>U41010-3|AAF98587.1| 655|Caenorhabditis elegans Hypothetical
protein T05A12.3 protein.
Length = 655
Score = 33.1 bits (72), Expect = 0.093
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 293 ERTESRRYKDSSPTSGYTKRNSLTNGVRDSNGNELPSVPEMRKKF 427
ER ++R SS S +S NG SNG+ P+ E+RK F
Sbjct: 338 EREKARAASSSSQKSSKPSSSSHNNGSTSSNGHSAPAKKEVRKPF 382
>Z47068-3|CAD56568.1| 278|Caenorhabditis elegans Hypothetical
protein F15G9.1c protein.
Length = 278
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 147 YSSNKSFRIRITGRYRDQSRSRTTSVDHQQPTHHAL*GKPGTRLSE 284
YSS+++ R R TG YRD+ S +TS +P + K T L +
Sbjct: 25 YSSSRTSRDRDTGSYRDRDYS-STSYTSTRPRYSTYASKYSTDLGK 69
>Z47068-1|CAA87331.1| 279|Caenorhabditis elegans Hypothetical
protein F15G9.1a protein.
Length = 279
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 147 YSSNKSFRIRITGRYRDQSRSRTTSVDHQQPTHHAL*GKPGTRLSE 284
YSS+++ R R TG YRD+ S +TS +P + K T L +
Sbjct: 25 YSSSRTSRDRDTGSYRDRDYS-STSYTSTRPRYSTYASKYSTDLGK 69
>AC024775-1|AAK68455.1| 456|Caenorhabditis elegans Hypothetical
protein Y41D4A.5 protein.
Length = 456
Score = 28.3 bits (60), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 85 EHGRALQVVFA--VELHTVDAENTAATKASESELRGDIEIKVDLER 216
EH +L V+ VEL+ + E + ESEL GD EI ++ E+
Sbjct: 177 EHRVSLVVILCKLVELNKIKCERYWPEQVGESELFGDYEITLEEEK 222
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 583 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 642
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 643 NNSENQNGN 651
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 617 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 676
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 677 NNSENQNGN 685
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 713 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 772
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 773 NNSENQNGN 781
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 583 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 642
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 643 NNSENQNGN 651
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 617 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 676
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 677 NNSENQNGN 685
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 713 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 772
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 773 NNSENQNGN 781
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 70 LVGFHEHGRALQVVFAVELHTVDAENTAATKAS 168
L GF + R+L ++++ TVDA NTA + S
Sbjct: 71 LYGFSNNFRSLTAIWSIVAVTVDAYNTAGRQTS 103
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 617 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 676
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 677 NNSENQNGN 685
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +2
Query: 185 EISRSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLT 364
+++ S +S I + PAA + A + +S+ +T+ +S +PT + +
Sbjct: 713 QLTSSTMMSKLINKTPAAGGTAATSSSSSSSATSTAPLQKSGSQISHAPTEPVIREDDDE 772
Query: 365 NGVRDSNGN 391
N + NGN
Sbjct: 773 NNSENQNGN 781
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 434 LDRTSFASRAQMVAHCHYCPSLRS*GSFVSCSPTSENYPC-NVGF 303
L+ +F+ V C Y S G C P SE+Y C N G+
Sbjct: 558 LEWWTFSENPANVGRCGYNAPRLSTGKIPKCDPDSESYCCSNSGY 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,950,228
Number of Sequences: 27780
Number of extensions: 154446
Number of successful extensions: 559
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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