Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H07f
(445 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01750.1 68416.m00112 ankyrin repeat family protein contains ... 33 0.066
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 30 0.81
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 29 1.9
At3g44350.1 68416.m04765 no apical meristem (NAM) family protein... 28 2.5
At2g32840.2 68415.m04021 proline-rich family protein Common fam... 28 2.5
At2g32840.1 68415.m04020 proline-rich family protein Common fam... 28 2.5
At1g09600.1 68414.m01077 protein kinase family protein contains ... 28 2.5
At1g02990.2 68414.m00269 expressed protein similar to mature-par... 28 2.5
At1g02990.1 68414.m00270 expressed protein similar to mature-par... 28 2.5
At2g33160.1 68415.m04063 glycoside hydrolase family 28 protein /... 27 4.3
At5g01320.1 68418.m00044 pyruvate decarboxylase, putative strong... 27 5.7
At1g75150.1 68414.m08729 expressed protein ; expression supporte... 27 5.7
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 27 7.5
At2g22610.1 68415.m02680 kinesin motor protein-related 27 7.5
At1g65260.1 68414.m07398 PspA/IM30 family protein contains Pfam ... 27 7.5
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 27 7.5
At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mann... 26 10.0
At2g41050.1 68415.m05069 PQ-loop repeat family protein / transme... 26 10.0
>At3g01750.1 68416.m00112 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 664
Score = 33.5 bits (73), Expect = 0.066
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 194 RSKSISNDIGRPPAADPSRALRKARNSAIGTTSERTES-RRYKDSSPTSGYTKRNSLTNG 370
RS S +IG+ D + L+K RN+++ +T+ER +S + G++K NS +
Sbjct: 464 RSSSCCIEIGQLNVMDENHHLKKCRNASVNSTTERLKSVFHWPRVKKQPGHSKNNSDISI 523
Query: 371 VRDSNGNELPSVPEMRKKF 427
+ + + VP +R++F
Sbjct: 524 ISTTLETQETPVP-LRQRF 541
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 29.9 bits (64), Expect = 0.81
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 203 SISNDIGRPPAADPSRALRKARNSA-IGTTSERTESRRYKDSSPTSGYTKRNSLTNGVRD 379
SIS R + S + R SA GTT +RT++ KD + +TKR
Sbjct: 101 SISLPAKRKERSISSLVVSTPRVSAQAGTTGKRTKAATRKDVRGSGSFTKRTVKKEEEFG 160
Query: 380 SNGNELPSVPEMRKKF 427
+ E S PE KKF
Sbjct: 161 DDHVESASSPETLKKF 176
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 281 GTTSERTESRRYKD--SSPTSGYTKRNSLTNGVRDSNGNELPSVPE 412
GTT + S R++ SSP+S + S++N + ++GN++ V E
Sbjct: 908 GTTKLKQRSERHEGVVSSPSSTILEGGSVSNRMSSTSGNQIVGVDE 953
>At3g44350.1 68416.m04765 no apical meristem (NAM) family protein
Tobacco elicitor-responsive gene (TERN), NAC-domain
protein, Nicotiana tabacum, EMBL:AB021178
Length = 228
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 260 KARNSAIGTTSERTESRRYKDSSPTSGYT-KRNSLTNGVRDSNGNELPSVPE 412
KA +A +T ++ S R D PT Y +RN +NGV S+ + + PE
Sbjct: 135 KAVETASVSTIPKSGSSRAFDRRPTEAYAIERNLPSNGVETSSRATISTSPE 186
>At2g32840.2 68415.m04021 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 291
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 188 ISRSKSISNDIGRPPAADPSRALRKARNSAIG--TTSERTESRRYKD--SSPT-SGYTKR 352
I RS S++N +PP DPS + +S G T R S D SP+ GYT R
Sbjct: 76 IRRSNSVTNSPHQPPHPDPSSLIYPFGSSGRGFPTRPVRQNSNSVADPVGSPSPGGYTPR 135
>At2g32840.1 68415.m04020 proline-rich family protein Common family
member: At1g04930 [Arabidopsis thaliana]
Length = 337
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 188 ISRSKSISNDIGRPPAADPSRALRKARNSAIG--TTSERTESRRYKD--SSPT-SGYTKR 352
I RS S++N +PP DPS + +S G T R S D SP+ GYT R
Sbjct: 76 IRRSNSVTNSPHQPPHPDPSSLIYPFGSSGRGFPTRPVRQNSNSVADPVGSPSPGGYTPR 135
>At1g09600.1 68414.m01077 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 714
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 227 PPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTK---RNSLTNGVRDSNGNEL 397
P A+DPS + I ++ E++R KD+S +K R S DSN L
Sbjct: 451 PLASDPSSLPKYQPRKEIDVKAQEEEAKRKKDTSSKQNDSKQVSRESKAVPAPDSNAESL 510
Query: 398 PSV 406
S+
Sbjct: 511 TSI 513
>At1g02990.2 68414.m00269 expressed protein similar to
mature-parasite-infected erythrocyte surface antigen
(GI:160409) {Plasmodium falciparum}
Length = 1238
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 203 SISNDIGRPPAADPSRALRK-ARNSAIGT-TSERTESRRYKDSSPTSGYTKRNSLTNGVR 376
SIS +PPA+D L K ++S IGT S+ + S+P++ T R + G
Sbjct: 85 SISGSASKPPASDVLVKLNKFVKSSHIGTPDSKHMSDAKTSSSAPSNHKTLRFRIKVGSS 144
Query: 377 D 379
D
Sbjct: 145 D 145
>At1g02990.1 68414.m00270 expressed protein similar to
mature-parasite-infected erythrocyte surface antigen
(GI:160409) {Plasmodium falciparum}
Length = 1069
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 203 SISNDIGRPPAADPSRALRK-ARNSAIGT-TSERTESRRYKDSSPTSGYTKRNSLTNGVR 376
SIS +PPA+D L K ++S IGT S+ + S+P++ T R + G
Sbjct: 85 SISGSASKPPASDVLVKLNKFVKSSHIGTPDSKHMSDAKTSSSAPSNHKTLRFRIKVGSS 144
Query: 377 D 379
D
Sbjct: 145 D 145
>At2g33160.1 68415.m04063 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Salix gilgiana] GI:6714524; contains
Pfam profile PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 664
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 311 RYKDSSPTSGYTKRNSLTNGVRD 379
RYK+ G T RNS+ NG D
Sbjct: 256 RYKEEKNVQGLTVRNSIINGTTD 278
>At5g01320.1 68418.m00044 pyruvate decarboxylase, putative strong
similarity to pyruvate decarboxylase 1 [Vitis vinifera]
GI:10732644; contains InterPro entry IPR000399: Pyruvate
decarboxylase
Length = 603
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 182 GEISRSKSISNDIGRPPAADPSRALRKARNSA-IGTTSERTESRRYKDSSPTSGYT 346
G I K + DIG P PS A+ ++SA I TTSE T R +G T
Sbjct: 6 GAIDTCKPTTGDIGSP----PSNAVATIQDSAPITTTSESTLGRHLSRRLVQAGVT 57
>At1g75150.1 68414.m08729 expressed protein ; expression supported
by MPSS
Length = 753
Score = 27.1 bits (57), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 215 DIGRPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLTNGVRDSNGNE 394
+I + PAA S L + S+I +E R + S+ GY +N ++ E
Sbjct: 627 EINKNPAASKSSFLGRLTKSSI------SEGSRKRGSNVVRGYIFERDDSNSKSSNSVAE 680
Query: 395 LPSVPE 412
PSVPE
Sbjct: 681 EPSVPE 686
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +2
Query: 224 RPPAADPSRALRKARNSAIGTTSERTESRRYKDSSPTSGYTKRNSLTNGVRDSNGNEL-P 400
+P +A ++ +S G + +E K +PT+GY KR + S G + P
Sbjct: 304 KPASAKKTKQTDSQSDSDAGEKAPSSEKSVKKPETPTTGYGKRVEHLKSIIKSCGMSISP 363
Query: 401 SVPEMRKK 424
SV K+
Sbjct: 364 SVYRKAKQ 371
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 269 NSAIGTTSERTESRRYKDSSPTSGYTKRNSLTNGVRDSNGNELPSVPEMR-KKFDP 433
N+ I TS R +++R+ + K+ + +G ++NG++ P + E R +K DP
Sbjct: 988 NTNILRTSNRLKTKRHDSLNLNEMTRKKRASRSGETENNGDD-PQMKEKRIRKSDP 1042
>At1g65260.1 68414.m07398 PspA/IM30 family protein contains Pfam
PF04012: PspA/IM30 family profile; similar to
Membrane-associated 30 kDa protein, chloroplast
precursor (M30) (Swiss-Prot:Q03943) [Pisum sativum];
similar to phage shock protein A (GI:28806161) [Vibrio
parahaemolyticus]; similar to Phage shock protein A.
(Swiss-Prot:P23853) [Shigella flexneri]
Length = 330
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = +3
Query: 189 YRDQSRSRTTSVDHQQPTHHAL*GKPGTRLSEPHLKEPKADVTRIVLRRRATRNETPLRT 368
+ D + + T +D Q+ L TRL E ++E KA ++ R R + T ++
Sbjct: 168 FADNATALKTQLDQQKGVVDNL--VSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQE 225
Query: 369 E*GTV 383
GTV
Sbjct: 226 MIGTV 230
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 8 TRSESGKTLSDAP-SRTKRNFSSSAFMSTAEL 100
+RS+SG +P S ++RNF+S + S AEL
Sbjct: 129 SRSDSGSESGCSPYSNSRRNFASGSSSSRAEL 160
>At3g21160.1 68416.m02673 mannosyl-oligosaccharide
1,2-alpha-mannosidase, putative similar to
mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine
max][GI:6552504]
Length = 572
Score = 26.2 bits (55), Expect = 10.0
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 8 TRSESGKT-LSDAPSRTKRNFSSSAFMSTA--ELYKLYSPSNYIPL 136
+R ESG L D + K N S F++ LY L+SP+ IPL
Sbjct: 478 SRIESGYVGLKDVNTGVKDNKMQSFFLAETLKYLYLLFSPTTVIPL 523
>At2g41050.1 68415.m05069 PQ-loop repeat family protein /
transmembrane family protein similar to SP|Q10482 Seven
transmembrane protein 1 {Schizosaccharomyces pombe};
contains Pfam profile PF04193: PQ loop repeat
Length = 376
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 162 SFRIRITGRYRDQSRSRTTSVDHQQPTHHAL*GKPGTRLSEPHLKEP 302
S R TGR + +R+ S H P L + SEP L+EP
Sbjct: 148 SQRTSFTGRELFYTSARSLSSSHTPPAGSVLAQRMARGYSEPTLEEP 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,478,242
Number of Sequences: 28952
Number of extensions: 145199
Number of successful extensions: 552
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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