Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H06f
(334 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 182 1e-45
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 179 1e-44
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 150 7e-36
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 143 8e-34
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 142 1e-33
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 131 3e-30
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 128 3e-29
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 124 5e-28
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 116 8e-26
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 108 2e-23
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 99 2e-20
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 88 4e-17
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 75 2e-13
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 72 3e-12
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 68 5e-11
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 66 1e-10
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 65 3e-10
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 64 6e-10
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 63 1e-09
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 61 6e-09
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 54 5e-07
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 54 6e-07
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 51 6e-06
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 48 4e-05
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 38 0.044
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.18
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 35 0.31
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 35 0.41
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 34 0.55
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 34 0.72
UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA methyl... 33 1.3
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 32 2.9
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 31 3.9
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 3.9
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 31 3.9
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 31 3.9
UniRef50_A1ZNA6 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 31 5.1
UniRef50_UPI00015B43E3 Cluster: PREDICTED: similar to GA21999-PA... 31 6.7
UniRef50_O81803 Cluster: Putative uncharacterized protein F8D20.... 31 6.7
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 31 6.7
UniRef50_UPI0000499C86 Cluster: hypothetical protein 121.t00005;... 30 8.9
UniRef50_A7JZV4 Cluster: Transcriptional regulator; n=9; Vibrio|... 30 8.9
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 30 8.9
UniRef50_Q2TFW8 Cluster: Leucine-rich-repeat protein 3; n=6; Pla... 30 8.9
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 30 8.9
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 182 bits (444), Expect = 1e-45
Identities = 87/103 (84%), Positives = 92/103 (89%)
Frame = +3
Query: 3 QATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV 182
Q VFL K K K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV
Sbjct: 55 QPHVFLASKVSSK-KPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV 113
Query: 183 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 311
QKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 114 QKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFRDV 156
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/36 (58%), Positives = 26/36 (72%), Gaps = 4/36 (11%)
Frame = +3
Query: 3 QATVFLNRKGGM----KRKDMRHHKNVGLGFKTPRE 98
Q T+FLNRK G+ K +R+ +NVGLGFKTPRE
Sbjct: 12 QPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 179 bits (435), Expect = 1e-44
Identities = 84/108 (77%), Positives = 94/108 (87%), Gaps = 5/108 (4%)
Frame = +3
Query: 3 QATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 167
Q T+F N+K + K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRI
Sbjct: 13 QPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRI 72
Query: 168 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 311
L+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 73 LSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 150 bits (363), Expect = 7e-36
Identities = 70/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 QATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV 182
Q +F N K ++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+ILTG V
Sbjct: 16 QPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTV 75
Query: 183 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR-DVGD 317
KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR VGD
Sbjct: 76 VSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGD 121
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 143 bits (346), Expect = 8e-34
Identities = 65/101 (64%), Positives = 78/101 (77%)
Frame = +3
Query: 3 QATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV 182
Q +F N K G R R +K+VGLGFKTP EAI G Y+DKKCPF G VSIRGRILTG V
Sbjct: 16 QPHIFQNAKKGAGR---RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTV 72
Query: 183 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 305
KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR
Sbjct: 73 VSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 142 bits (344), Expect = 1e-33
Identities = 66/106 (62%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Frame = +3
Query: 3 QATVFLNRKGGMKRKD---MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILT 173
Q +F N K + +K +R+ K VGLGFK P++AIEG YIDKKCPFTGNVS+RG IL
Sbjct: 42 QEGIFQNSKKLLAKKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVRGAILK 101
Query: 174 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 311
G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V
Sbjct: 102 GIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPV 147
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 131 bits (316), Expect = 3e-30
Identities = 57/88 (64%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +3
Query: 36 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIV 212
+K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRGRIL GVV KM+RT+V
Sbjct: 29 LKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRGRILRGVVVSAGKMKRTVV 88
Query: 213 IRRDYLHYLPKYNRFEKRHRNMSVHLSP 296
+RR+YLHY+ KY R+EKRH N SVH SP
Sbjct: 89 VRRNYLHYIQKYKRYEKRHTNFSVHCSP 116
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 128 bits (308), Expect = 3e-29
Identities = 55/94 (58%), Positives = 72/94 (76%)
Frame = +3
Query: 21 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 200
+RK K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM
Sbjct: 5 SRKHVNKSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMH 64
Query: 201 RTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 302
RTI+IRR+YLH++ KY R++KRH++++VH SP F
Sbjct: 65 RTIIIRRNYLHFIKKYQRYQKRHKSLAVHCSPAF 98
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 124 bits (298), Expect = 5e-28
Identities = 52/90 (57%), Positives = 65/90 (72%)
Frame = +3
Query: 36 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 215
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 216 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 305
RRDYLH++ KY RFEKRH+N+ H SPCFR
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR 105
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 116 bits (280), Expect = 8e-26
Identities = 65/130 (50%), Positives = 79/130 (60%), Gaps = 29/130 (22%)
Frame = +3
Query: 3 QATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 167
Q VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI
Sbjct: 12 QPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI 71
Query: 168 LTGVVQKMKMQRTIVIRRDYLHYLPKYN------------------------RFEKRHRN 275
+ G KM RTI++RR+YLH++ KY R+EKRH N
Sbjct: 72 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYEKRHSN 131
Query: 276 MSVHLSPCFR 305
+ H+SPCFR
Sbjct: 132 IPAHVSPCFR 141
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 108 bits (260), Expect = 2e-23
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Frame = +3
Query: 78 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRF 257
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK ++TIV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 258 EKRHRNMSVHLSPCFR---DVGD 317
+RH N SVH+SPCF +VGD
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGD 120
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 99.1 bits (236), Expect = 2e-20
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +3
Query: 21 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQ 200
N +G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ
Sbjct: 31 NLEGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQ 90
Query: 201 RTIVIRRDYLHYL 239
TI++ RDYLH++
Sbjct: 91 STIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 87.8 bits (208), Expect = 4e-17
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +3
Query: 117 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLS 293
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLS 81
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 75.4 bits (177), Expect = 2e-13
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +3
Query: 48 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 227
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 228 LHYLPKYNRFEKRHRNMSVHLSPC 299
Y KY R+E+R + H PC
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPC 83
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 71.7 bits (168), Expect = 3e-12
Identities = 26/64 (40%), Positives = 45/64 (70%)
Frame = +3
Query: 120 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 299
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 300 FRDV 311
DV
Sbjct: 79 IGDV 82
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 67.7 bits (158), Expect = 5e-11
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +3
Query: 63 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 242
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 243 KYNRFEKRHRNMSVHLSPCF-RDVGD 317
KY R+EKR + H C VGD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 66.5 bits (155), Expect = 1e-10
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +3
Query: 63 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 242
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 243 KYNRFEKRHRNMSVHLSPCFR-DVGD 317
KY R+ ++ RN+ HL C + +VGD
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIKVNVGD 113
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 64.9 bits (151), Expect = 3e-10
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +3
Query: 69 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 248
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 249 NRFEKRHRNMSVHLSPCF-RDVGD 317
+RF KR + H C VGD
Sbjct: 59 DRFMKRRSRVPAHAPDCLDLAVGD 82
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 64.1 bits (149), Expect = 6e-10
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +3
Query: 63 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 242
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 243 KYNRFEKRHRNMSVHLSPCFR 305
KY R + + VH+ C +
Sbjct: 60 KYERKATKIKKYHVHVPDCIK 80
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 120 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 299
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 63 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 242
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 243 KYNRFEKRHRNMSVHLSPC 299
KYNR+E+R + M V + C
Sbjct: 61 KYNRYERRRKRMRVRVPEC 79
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/60 (38%), Positives = 35/60 (58%)
Frame = +3
Query: 120 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 299
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 54.0 bits (124), Expect = 6e-07
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = +3
Query: 120 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 299
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 300 FRDV 311
+D+
Sbjct: 76 LKDI 79
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 50.8 bits (116), Expect = 6e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +3
Query: 63 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 239
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 240 PKYNRFEKRHRNMSVHLSPCFR-DVGD 317
KY R ++ + + PC +GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 48.0 bits (109), Expect = 4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 63 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 239
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 240 PKYNRFEKRHRNMSVHL 290
K+ R+ + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 37.9 bits (84), Expect = 0.044
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 159 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVTGD 77
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.18
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +3
Query: 90 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 269
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 270 RNMS 281
R S
Sbjct: 159 RGKS 162
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 35.1 bits (77), Expect = 0.31
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 150 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S ++GD
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSKNKAEIGD 59
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 34.7 bits (76), Expect = 0.41
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 162 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
+I+TG V M +TI + D L PKY++F ++ R H ++GD
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDENNECEIGD 55
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 34.3 bits (75), Expect = 0.55
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = -3
Query: 302 EARRQMYGHVPVPFLEPIVFG*VVKVIXXXXXXXXXXXXXXXAGEDAXADRNVASEGTLL 123
E+ R + ++ V F ++F V++VI G+D +D N SE T
Sbjct: 88 ESWRDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFF 147
Query: 122 VNVGTLNRLSGSFE 81
VNV T N FE
Sbjct: 148 VNVRTFNGSFWGFE 161
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.9 bits (74), Expect = 0.72
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 24 RKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTG 176
R G +R+D + H N G RE + GT+ K TG S G +TG
Sbjct: 39 RHGIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTG 89
>UniRef50_Q97ZH0 Cluster: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase); n=2;
Sulfolobus|Rep: N(2),N(2)-dimethylguanosine tRNA
methyltransferase (EC 2.1.1.32)
(tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
2,2- dimethylguanosine-26 methyltransferase)
(tRNA(m(2,2)G26)dimethyltransferase) - Sulfolobus
solfataricus
Length = 378
Score = 33.1 bits (72), Expect = 1.3
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 12 VFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDK----KCPFTGNV-SIRGRILTG 176
+F+ + G ++ D +K++ + PR + T++++ KCP G + SI G + G
Sbjct: 221 LFVRVENGARKADDNINKHLKYFGECPRCGFQ-TFVEENCKTKCPVCGEIFSIIGPLYIG 279
Query: 177 VVQKMKMQRTIVIRRDYLHYLPKYNRFEK 263
+ M+ + I+ +YL +NR +K
Sbjct: 280 PLYSMEFLKRIMDLYSNFNYLTSFNRIQK 308
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 22 TGKVA*RGRTCVTIRMLV*ASKLPERRLRVPTLTRSVPSL 141
TG++A R +R+L + +PE RL V TL RS+PS+
Sbjct: 83 TGELAMLARLARLLRVLRLITAIPELRLIVATLMRSIPSM 122
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 31.5 bits (68), Expect = 3.9
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 57 HHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 206
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 150 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 290
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.5 bits (68), Expect = 3.9
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 156 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVND 385
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 31.5 bits (68), Expect = 3.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 168 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 287
LTG+V KM +T+V+ + L P Y ++ KR + H
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAH 45
>UniRef50_A1ZNA6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 888
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +3
Query: 39 KRKDMRHHKNVGLGFKTPREAIE---GTYIDKKCPFTGNVSI 155
K K+ ++KNVG+G TP E +E T +D TG V I
Sbjct: 535 KHKEDANNKNVGIGTNTPGEKLEVKGNTKLDGDTEVTGKVGI 576
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 162 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 287
R+LTG V KM +T+ + D P Y +F +R + + H
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAH 45
>UniRef50_UPI00015B43E3 Cluster: PREDICTED: similar to GA21999-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA21999-PA - Nasonia vitripennis
Length = 641
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 135 RDTSCQCRYPQSPLWEF*SLNQHSYGDACPSSSCHLSCSG 16
+D +C+CR P PL S+ + ++ S +C L C G
Sbjct: 224 KDCTCRCRPPLIPLISSSSIQEKDAAESLGSLNCVLPCQG 263
>UniRef50_O81803 Cluster: Putative uncharacterized protein
F8D20.230; n=2; Arabidopsis thaliana|Rep: Putative
uncharacterized protein F8D20.230 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 325
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 15 FLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTG 143
FL+ G+K K+ HHK G+ K ++ IE + +K+ TG
Sbjct: 203 FLSSPKGLKTKNHHHHKGWGIVMKLVKKGIEHHHQEKRDYETG 245
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 165 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
+L G+V + KMQ++IV+ + + Y +F R + VH + +VGD
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNVGD 57
>UniRef50_UPI0000499C86 Cluster: hypothetical protein 121.t00005;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 121.t00005 - Entamoeba histolytica HM-1:IMSS
Length = 429
Score = 30.3 bits (65), Expect = 8.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 45 KDMRHHKNVGLGFKTPREAIE 107
KDM+HH+N+ + K P+E I+
Sbjct: 359 KDMKHHQNISILLKRPKEGIK 379
>UniRef50_A7JZV4 Cluster: Transcriptional regulator; n=9;
Vibrio|Rep: Transcriptional regulator - Vibrio sp. Ex25
Length = 483
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 144 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 254
NVS R+L + + +K ++VI Y H+L +Y+R
Sbjct: 86 NVSFTRRLLNKITEIVKKPSSLVIESFYQHFLSEYDR 122
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 162 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVGD 317
+ + G V KMQ ++V+ D L + YNR+ KR H ++GD
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEKDSCNIGD 53
>UniRef50_Q2TFW8 Cluster: Leucine-rich-repeat protein 3; n=6;
Plasmodium|Rep: Leucine-rich-repeat protein 3 -
Plasmodium falciparum
Length = 338
Score = 30.3 bits (65), Expect = 8.9
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +3
Query: 45 KDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGN----VSIRGRILTGVVQKMK-MQRTI 209
K+MRH K + L F RE G++ + N ++I I+ K+ +Q
Sbjct: 164 KEMRHLKKISLSFNKIREFYFGSHFSQIYELRLNNNKLINISKDIIYMTNLKLLCIQNNF 223
Query: 210 VIRRDYLHYLPKYN 251
+I +D+L+YL + N
Sbjct: 224 IINQDFLNYLSQLN 237
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +3
Query: 162 RILTGVVQKMKMQR--TIVIRRDYLHYLPKYNRFEKRHRNMSVH 287
++LTGVV KMQ+ T+++ R + H P Y + KR + H
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH 45
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 327,830,686
Number of Sequences: 1657284
Number of extensions: 5581747
Number of successful extensions: 13195
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 12950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13191
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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