Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H06f
         (334 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...   144   1e-36
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   2.3  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           22   5.3  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    21   9.3  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score =  144 bits (348), Expect = 1e-36
 Identities = 66/103 (64%), Positives = 83/103 (80%)
 Frame = +3

Query: 3   QATVFLNRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV 182
           Q  + LNRK   ++K +R H ++GLGFKTP+EAI GTYIDKKCPFTG++SIRGRILTGVV
Sbjct: 13  QLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVV 72

Query: 183 QKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 311
           +K  +   + IRRDYL ++ KY+ FEKR+RNM +HLSPCFRDV
Sbjct: 73  RKCIV--LLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDV 113


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 173  GEDAXADRNVASEGTLLVNVGT 108
            GED   D+   S+GTLL  +GT
Sbjct: 1268 GEDDTGDKKTDSDGTLL-EIGT 1288


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 50  HASP*ECWFRLQNSQRGD*GYLH 118
           H  P EC   + +S     GYLH
Sbjct: 82  HYEPMECHSAVNSSSNSSTGYLH 104


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 39  KRKDMRHHKNVGLGFKTPREAIEGTY 116
           K  D+R + N  + F  P E   G Y
Sbjct: 71  KMVDVRRNMNRMINFNMPEELTAGNY 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,152
Number of Sequences: 2352
Number of extensions: 5763
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23342418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)