Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H05f
         (462 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.32 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   0.98 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   3.0  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    23   5.2  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.9  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   6.9  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    22   9.1  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    22   9.1  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.32
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +1

Query: 13  YGAPVWCHVLTH-ENVAALXXXXXXXXXXXXXXYLTVSYE 129
           YGAPVW H+L   ++   +              Y T+SYE
Sbjct: 825 YGAPVWAHILKEKQHQNTVNKVHRKLAMRVTSAYRTISYE 864


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.4 bits (53), Expect = 0.98
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 13  YGAPVWCHVLTHEN 54
           Y +P+WCH L   N
Sbjct: 768 YASPIWCHTLRFAN 781


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -1

Query: 366 RFVAVRSLHGGKMSCESAQVAGGETSAVAAHPVRENRADRL 244
           R +  R +HGG +  ++    G E   +   PV+     +L
Sbjct: 498 RCIVARIMHGGMIHRQATLHVGDEIREINGQPVQHQTVSQL 538


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.0 bits (47), Expect = 5.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 269 TGWAATAEVSPPATCADSQDILP 337
           +GW    +V+P  TC D+  +LP
Sbjct: 171 SGWGVCTKVAPYQTCFDT-TVLP 192


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -1

Query: 231 AGRRVRQTTRPRLQHGLPILEPP--RSGCTCARAR 133
           A RRV+ + R R Q   P  +PP  R    CA  R
Sbjct: 212 AARRVKLSQRNRSQQRSPRRDPPINRQHTPCAGRR 246


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 21/91 (23%), Positives = 31/91 (34%)
 Frame = -1

Query: 276 HPVRENRADRLDGTEAGRRVRQTTRPRLQHGLPILEPPRSGCTCARARRLVGDCEVSLNN 97
           HP+++     L       R   TTR R +     L+    GC+           E  +N 
Sbjct: 120 HPIKKMAVSILSALACVERELMTTRLRAERTEKSLKEALEGCS---------QTETPVNG 170

Query: 96  SDCDRALPASQRGDVLVGKDVAPDGCSVVPS 4
                     +  D    K+ AP G S+V S
Sbjct: 171 KRGRNLRSTEEADDAKRAKNDAPSGSSLVAS 201


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 134 RALAQVQPERGGSNIGSPCW 193
           R    V   + G  IG+PCW
Sbjct: 2   RECISVHVGQAGVQIGNPCW 21


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 284 TAEVSPPATCADSQDILPPC 343
           T   + P TCAD  ++  PC
Sbjct: 43  TCGTACPNTCADLNELQKPC 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,722
Number of Sequences: 2352
Number of extensions: 7879
Number of successful extensions: 62
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)