Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301H05f
(462 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family... 28 3.5
At4g11800.1 68417.m01879 calcineurin-like phosphoesterase family... 27 4.7
At2g15240.1 68415.m01738 UNC-50 family protein contains Pfam pro... 27 4.7
At1g53570.2 68414.m06081 mitogen-activated protein kinase kinase... 27 4.7
At1g53570.1 68414.m06080 mitogen-activated protein kinase kinase... 27 4.7
At4g22890.3 68417.m03307 expressed protein 27 6.2
At4g22890.2 68417.m03306 expressed protein 27 6.2
At4g22890.1 68417.m03305 expressed protein 27 6.2
At5g47490.1 68418.m05864 expressed protein 27 8.2
At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein ... 27 8.2
>At4g23000.1 68417.m03318 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 932
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 275 WAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGST 406
W E++ +C DS D + P L AT + + ANY ST
Sbjct: 279 WVIYGELACNGSCPDSSDEISPIYSLWATFIGLYIANYVVERST 322
>At4g11800.1 68417.m01879 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1012
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 275 WAATAEVSPPATCADSQDILPPCKLLTATNLTSHHANYNFTGST 406
W E++ +C DS D + P L AT + + ANY ST
Sbjct: 236 WFIYGEIACNGSCPDSADEISPIYSLWATFIGLYIANYVVERST 279
>At2g15240.1 68415.m01738 UNC-50 family protein contains Pfam
profile PF05216: UNC-50 family; contains 5 transmembrane
domains; similar to inner nuclear membrane RNA-binding
protein unc-50 related protein (GI:2735550) [Rattus
norvegicus]
Length = 252
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 327 TFYHHANFLPQQILPATTQTTILRVP 404
++YH+ NFL +LP +TT P
Sbjct: 196 SYYHYLNFLGYDVLPFLERTTFFLYP 221
>At1g53570.2 68414.m06081 mitogen-activated protein kinase kinase
kinase (MAPKKK), putative (MAP3Ka) identical to MEK
kinase (MAP3Ka)[Arabidopsis thaliana]
gi|4204912|gb|AAD10848
Length = 608
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 17 EHPSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTR-RRALAQVQPER 163
+H SG+TS T S +GSA QS+L + + A A PER
Sbjct: 88 DHVSGSTSGSTSVSSVSSSGSADDQSQLVASRGRGDVKFNVAAAPRSPER 137
>At1g53570.1 68414.m06080 mitogen-activated protein kinase kinase
kinase (MAPKKK), putative (MAP3Ka) identical to MEK
kinase (MAP3Ka)[Arabidopsis thaliana]
gi|4204912|gb|AAD10848
Length = 609
Score = 27.5 bits (58), Expect = 4.7
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 17 EHPSGATSLPTRTSPRCDAGSARSQSELFNDTSQSPTR-RRALAQVQPER 163
+H SG+TS T S +GSA QS+L + + A A PER
Sbjct: 88 DHVSGSTSGSTSVSSVSSSGSADDQSQLVASRGRGDVKFNVAAAPRSPER 137
>At4g22890.3 68417.m03307 expressed protein
Length = 324
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 29 GATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQP 157
G+ L + TSPR + +R S F+ + SP+ R Q+ P
Sbjct: 2 GSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSP 44
>At4g22890.2 68417.m03306 expressed protein
Length = 324
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 29 GATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQP 157
G+ L + TSPR + +R S F+ + SP+ R Q+ P
Sbjct: 2 GSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSP 44
>At4g22890.1 68417.m03305 expressed protein
Length = 324
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 29 GATSLPTRTSPRCDAGSARSQSELFNDTSQSPTRRRALAQVQP 157
G+ L + TSPR + +R S F+ + SP+ R Q+ P
Sbjct: 2 GSKMLFSLTSPRLFSAVSRKPSSSFSPSPPSPSSRTQWTQLSP 44
>At5g47490.1 68418.m05864 expressed protein
Length = 1361
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 184 SVLEAWSRRLADPSAGLRTV-EAICPVLADWVGRDRGSLTSGYLCRL--TRHFTTMQTSY 354
S+L++W L +A T E + L D + ++RG + + ++C L ++F T +
Sbjct: 796 SMLDSWEENLGIITANRTTDDELVITHLGDCMWKERGEIIAAHICYLIADKNFDTYSDTA 855
Query: 355 R 357
R
Sbjct: 856 R 856
>At2g28450.1 68415.m03456 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 809
Score = 26.6 bits (56), Expect = 8.2
Identities = 9/20 (45%), Positives = 17/20 (85%)
Frame = -1
Query: 213 QTTRPRLQHGLPILEPPRSG 154
+TT+P+ ++ + I++PPRSG
Sbjct: 690 KTTKPQFKNVVAIVDPPRSG 709
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,891,703
Number of Sequences: 28952
Number of extensions: 157153
Number of successful extensions: 606
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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