Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H04f
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    27   0.42 
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   3.9  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   3.9  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   3.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   3.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    22   9.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   9.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   9.0  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 26.6 bits (56), Expect = 0.42
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -2

Query: 434 LILPNVCI-LKQPAILYWGHSFSKSLYNNIRPYQQNLYTLCGHKIYQILFLIIKFVTLQP 258
           LIL NVC  LKQP  LY G + S  L +  +    + Y + G  + + +  I      + 
Sbjct: 175 LILRNVCTSLKQPE-LYEGQNLSNQLLDIFKQCSTDDYAVAGRFVSEAVNEIFTDTETES 233

Query: 257 *TFLILV*IF 228
             F I+  IF
Sbjct: 234 EGFAIIRGIF 243


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 299 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 397
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 275 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 307


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 299 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 397
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 275 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 307


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 299 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 397
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 253 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 285


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = +2

Query: 269 LQTLLSKIESDIFYDHT-----VYTGSAGMALYYYTSSLKMNDPSKE 394
           L    +K+ SD F   T       T   G  LY YT  L +N P KE
Sbjct: 787 LNKYCAKLPSDTFTKLTPIWRCATTVRKGRKLYQYTIRLPINSPWKE 833


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 185 SAANVLDESGEQISQKFKLKLEKFK 259
           S A  +DE    + QK +L+ E+FK
Sbjct: 828 SRARKIDEEERSLRQKQELEREEFK 852


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 101 LDNNYGDRTINRRQYNRY 48
           L N YGD    R  +NRY
Sbjct: 596 LMNKYGDSKSQRNIFNRY 613


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 101 LDNNYGDRTINRRQYNRY 48
           L N YGD    R  +NRY
Sbjct: 596 LMNKYGDSKSQRNIFNRY 613


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,373
Number of Sequences: 2352
Number of extensions: 7728
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)