Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H03f
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   5.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   5.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   5.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    20   9.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 307 RTYWSSKR 284
           RTYWS+KR
Sbjct: 215 RTYWSAKR 222


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 443 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 339
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 107


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 443 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 339
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 258


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 443 LDHMGSRQRMQQEQG--ECREPLAGLEQHQHSMAKQH 339
           ++    R+R +QE+   + +E    +EQ  HS   QH
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 317


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 67 CTRFSSNYKGSSDEYDRFE 11
          CTR SS    ++D Y   E
Sbjct: 41 CTRISSTVSRNTDTYPTLE 59


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 298 NRCGTSCCSSSGILCCFAIL 357
           N C ++ CS++G L C  ++
Sbjct: 300 NECLSNPCSNAGTLDCVQLV 319


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = +1

Query: 328 SGILCCFAILCWCC 369
           + +  CFA++C  C
Sbjct: 1   TAVAICFALMCIAC 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,130
Number of Sequences: 336
Number of extensions: 1681
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)