Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H01f
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    27   2.6  
Z49132-6|CAA88985.1|  406|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z27078-9|CAA81586.2|  378|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z27078-4|CAB76843.1|  373|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z19153-8|CAD45582.1|  378|Caenorhabditis elegans Hypothetical pr...    27   4.5  
AY303580-1|AAP57302.1|  373|Caenorhabditis elegans cell death-re...    27   4.5  
U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical pr...    26   6.0  
Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical pr...    26   7.9  
AF220525-1|AAF43008.1|  352|Caenorhabditis elegans DNAse II homo...    26   7.9  
AF016418-8|AAK18897.1|  330|Caenorhabditis elegans Serpentine re...    26   7.9  

>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical
           protein F31C3.3 protein.
          Length = 2029

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = -1

Query: 149 KRWEYLA*N*WSRREHQ----QFQISFN-FVTINVAQMIVDKPANII 24
           +RW +L      + E +    QF+  F  F+T+N  + ++DK +++I
Sbjct: 471 RRWSHLERERVYKEEREKRANQFEFKFKQFITVNTLEFLIDKQSSVI 517


>Z49132-6|CAA88985.1|  406|Caenorhabditis elegans Hypothetical
           protein ZK666.6 protein.
          Length = 406

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = +1

Query: 94  NCWCSRRDHQFHAKYSQRFPFQLSVCLVRVF*RSRWRKGLGVRFSKN 234
           NC+C     Q+   Y+    ++  VC++ V   + WR       ++N
Sbjct: 235 NCFCRNSWIQYRVSYTDVHSYRYGVCILPVGFNAVWRAAKSSCMNRN 281


>Z27078-9|CAA81586.2|  378|Caenorhabditis elegans Hypothetical
          protein K04H4.6b protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 15 NNPNNISWFVYYHLSNI 65
          NN +N+ WFV+Y L ++
Sbjct: 24 NNGSNVDWFVFYKLPHL 40


>Z27078-4|CAB76843.1|  373|Caenorhabditis elegans Hypothetical
          protein K04H4.6a protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 15 NNPNNISWFVYYHLSNI 65
          NN +N+ WFV+Y L ++
Sbjct: 24 NNGSNVDWFVFYKLPHL 40


>Z19153-8|CAD45582.1|  378|Caenorhabditis elegans Hypothetical
          protein K04H4.6b protein.
          Length = 378

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 15 NNPNNISWFVYYHLSNI 65
          NN +N+ WFV+Y L ++
Sbjct: 24 NNGSNVDWFVFYKLPHL 40


>AY303580-1|AAP57302.1|  373|Caenorhabditis elegans cell
          death-related nuclease 6 protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 15 NNPNNISWFVYYHLSNI 65
          NN +N+ WFV+Y L ++
Sbjct: 24 NNGSNVDWFVFYKLPHL 40


>U61949-9|AAB03156.3|  433|Caenorhabditis elegans Hypothetical
           protein F49E8.1 protein.
          Length = 433

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -3

Query: 117 VPTRTPTVSDIFQ-FRNNQCCSND 49
           +PTRTP  SD+F+ + + + C N+
Sbjct: 323 IPTRTPEFSDVFRLYLSMKVCGNN 346


>Z70035-2|CAA93862.1|  440|Caenorhabditis elegans Hypothetical
           protein R09D1.2 protein.
          Length = 440

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -2

Query: 229 WKIEHLNLYAIENVKKLALSTQIAEKENVG 140
           WK +    +  EN K +A+ T+ A   N+G
Sbjct: 373 WKPDERRFFTFENQKSIAIKTRYAIDMNLG 402


>AF220525-1|AAF43008.1|  352|Caenorhabditis elegans DNAse II
          homolog K04H4.6 protein.
          Length = 352

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 15 NNPNNISWFVYYHL 56
          NN +N+ WFV+Y L
Sbjct: 7  NNGSNVDWFVFYKL 20


>AF016418-8|AAK18897.1|  330|Caenorhabditis elegans Serpentine
           receptor, class h protein169 protein.
          Length = 330

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 245 IRTKKKLCLVRNVLFIYFLKCSFXIFF 325
           ++T  K+  VRN +F+  L C+F  F+
Sbjct: 39  MKTPSKMQNVRNTMFLLHLVCAFSDFY 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,871,916
Number of Sequences: 27780
Number of extensions: 127394
Number of successful extensions: 329
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 329
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)