Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301H01f
         (338 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35917.1 68418.m04317 cytochrome P450, putative similar to Cy...    27   2.4  
At5g35880.1 68418.m04309 hypothetical protein                          27   2.4  
At1g60180.1 68414.m06779 hypothetical protein similar to hypothe...    26   5.6  
At1g05720.1 68414.m00596 selenoprotein family protein contains P...    26   7.4  
At3g30842.1 68416.m03968 ABC transporter protein, putative simil...    25   9.7  
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr...    25   9.7  

>At5g35917.1 68418.m04317 cytochrome P450, putative similar to
           Cytochrome P450 79A2 (SP:Q9FLC8) {Arabidopsis thaliana}
          Length = 490

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 132 SMKLMVPTRTPTVSDIFQFRNNQCCSNDSRQTS*YYLDCYFI 7
           S KLM+  RT    ++ ++ NN+C  N         +D  F+
Sbjct: 154 SFKLMLEKRTEEADNLVRYINNRCVKNRGNGNGLAVIDLRFV 195


>At5g35880.1 68418.m04309 hypothetical protein
          Length = 52

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 259 FFRSNLKLNFWKIEHLNLYAIENVK 185
           F+R N+KL FW+ E++  +  ENV+
Sbjct: 13  FWRENVKLRFWR-ENVKSFLAENVE 36


>At1g60180.1 68414.m06779 hypothetical protein similar to
           hypothetical protein GI:6017113 from [Arabidopsis
           thaliana]
          Length = 296

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 30  ISWFVYYHLSNIDCYEIERYLKLL 101
           +  F+Y HL  +D Y ++  LK+L
Sbjct: 106 VDCFIYSHLKTLDAYLLQDILKML 129


>At1g05720.1 68414.m00596 selenoprotein family protein contains
           Prosite PS00190: Cytochrome c family heme-binding site
           signature; similar to 15 kDa selenoprotein (GI:12314088)
           {Homo sapiens}
          Length = 163

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 253 RSNLKLNFWKIEHLNLYAIENVKKLALS 170
           + +++++ WK EHL  Y  E VK  A S
Sbjct: 136 KESIRIDNWKREHLLQYMREKVKPTAAS 163


>At3g30842.1 68416.m03968 ABC transporter protein, putative similar to
            pleiotropic drug resistance like protein [Nicotiana
            tabacum] GI:20522008, ABC1 protein [Nicotiana
            plumbaginifolia] GI:14331118; contains Pfam profile
            PF00005: ABC transporter
          Length = 1406

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 79   LKDI*NCWCSRRDHQFHAKYSQRFPFQLSVCLVRVF*RSRWR 204
            +K++ N     +D  F  KYSQ +  Q   CL +   +S WR
Sbjct: 1109 IKELNNIPPHAQDIHFSTKYSQSYLSQFQACLWKQH-KSYWR 1149


>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
           protein similar to SKP1 interacting partner 6
           [Arabidopsis thaliana] GI:10716957; contains Pfam
           profiles PF00646: F-box domain, PF01344: Kelch motif
          Length = 372

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 266 CLVRNVLFIYFLK 304
           C++ NVLF+YFL+
Sbjct: 267 CVIDNVLFVYFLR 279


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,189,293
Number of Sequences: 28952
Number of extensions: 109379
Number of successful extensions: 207
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)