Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G12f
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   7.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   7.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.5  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   10.0 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   10.0 

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 428 LKNGEHLNNMPMTMFLCGPIDLCFYSLY 511
           LKN ++  +  ++ + C PI++ F  LY
Sbjct: 680 LKNMKYTRSADLSSYNCVPINVQFSVLY 707


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 472 PVWSNRPVFLF 504
           P+WSN P++ +
Sbjct: 311 PIWSNFPIYKY 321


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +1

Query: 472 PVWSNRPVFLF 504
           P+WSN P++ +
Sbjct: 311 PIWSNFPIYKY 321


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 364 SRAAYEKGKDIDEGHRTGSAALGG 293
           ++A  E  ++ID G+ T  A +GG
Sbjct: 618 NQAVREFAREIDAGYITIEAIIGG 641


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 177 FTQPTNPITIKIMSILYK 124
           F+   NPI   +MSI Y+
Sbjct: 319 FSTTINPILYNLMSIKYR 336


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 87  KRHSIQTFIYFLIYTKYSL 143
           +R +  TF+Y   YTKY++
Sbjct: 221 QRLTSSTFVYDPRYTKYTI 239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,461
Number of Sequences: 438
Number of extensions: 3772
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)