BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS301G11f (368 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related prote... 31 1.5 BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein pr... 31 1.5 BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein pr... 31 1.5 AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related pro... 31 1.5 AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 30 2.0 M31423-1|AAA51962.1| 223|Homo sapiens CDR1 protein. 30 2.7 M16965-1|AAA52472.1| 223|Homo sapiens CDR1 protein. 30 2.7 BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar degeneration... 30 2.7 BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar degeneration... 30 2.7 AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar degeneration... 30 2.7 D87076-1|BAA13245.2| 849|Homo sapiens KIAA0239 protein. 29 4.7 BC021962-1|AAH21962.2| 791|Homo sapiens PHF15 protein protein. 29 4.7 BC009307-1|AAH09307.2| 574|Homo sapiens PHF15 protein protein. 29 4.7 AK074123-1|BAB84949.1| 639|Homo sapiens FLJ00195 protein protein. 29 4.7 AJ251833-1|CAB94935.1| 576|Homo sapiens hypothetical protein pr... 29 4.7 Y08806-1|CAA70044.1| 353|Homo sapiens EWS protein. 29 6.2 Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 29 6.2 X92120-1|CAA63088.1| 283|Homo sapiens CHOP,EWS protein. 29 6.2 X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 29 6.2 X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 29 6.2 U35622-1|AAB03569.2| 478|Homo sapiens EWS protein/E1A enhancer ... 29 6.2 CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 29 6.2 BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 29 6.2 BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 29 6.2 BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 29 6.2 BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein. 29 6.2 AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 29 6.2 AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 29 6.2 AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 29 6.2 AF327066-1|AAK11227.1| 476|Homo sapiens Ewings sarcoma EWS-Fli1... 29 6.2 AF254088-1|AAG09037.1| 609|Homo sapiens EWS/ZSG fusion protein ... 29 6.2 AF254087-1|AAG09036.1| 713|Homo sapiens EWS/ZSG fusion protein ... 29 6.2 AF254086-1|AAG09035.1| 609|Homo sapiens EWS/ZSG fusion protein ... 29 6.2 >L04288-1|AAA35734.2| 1462|Homo sapiens cyclophilin-related protein protein. Length = 1462 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +3 Query: 66 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 233 P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS Sbjct: 690 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 749 >BX957215-1|CAF29506.1| 1162|Homo sapiens hypothetical protein protein. Length = 1162 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +3 Query: 66 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 233 P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS Sbjct: 390 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 449 >BX640751-1|CAE45859.1| 590|Homo sapiens hypothetical protein protein. Length = 590 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +3 Query: 66 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 233 P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS Sbjct: 437 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 496 >AF184110-1|AAD56402.1| 1462|Homo sapiens cyclophilin-related protein protein. Length = 1462 Score = 30.7 bits (66), Expect = 1.5 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +3 Query: 66 PFARARAVWSRK-SHTFQDPRTLRSAYS---APSPHARSESAYHKRSSCDQGAAYHQRSS 233 P +R+R+ SR S ++ R+L S++S +PS + S + Y S C + ++Y SS Sbjct: 690 PRSRSRSSRSRSYSRSYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRSSSYTSISS 749 >AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. Length = 198 Score = 30.3 bits (65), Expect = 2.0 Identities = 24/73 (32%), Positives = 32/73 (43%) Frame = +3 Query: 15 PQNHFRPGCHGRHEPG*PFARARAVWSRKSHTFQDPRTLRSAYSAPSPHARSESAYHKRS 194 PQ P CH RA SR++H+ + L S + SPH+RS S H RS Sbjct: 67 PQKSHSPLCHSWSRNRLAHGSTRACSSRRAHSSWS-QNLHS--QSHSPHSRSHSP-HSRS 122 Query: 195 SCDQGAAYHQRSS 233 ++ RSS Sbjct: 123 HSPHSWSHSLRSS 135 >M31423-1|AAA51962.1| 223|Homo sapiens CDR1 protein. Length = 223 Score = 29.9 bits (64), Expect = 2.7 Identities = 6/26 (23%), Positives = 24/26 (92%) Frame = +1 Query: 166 VQKVPIIKEVPVIKELPIIREVPVVK 243 ++ VP+++++P+++++P++ +VP+++ Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLLE 35 >M16965-1|AAA52472.1| 223|Homo sapiens CDR1 protein. Length = 223 Score = 29.9 bits (64), Expect = 2.7 Identities = 6/26 (23%), Positives = 24/26 (92%) Frame = +1 Query: 166 VQKVPIIKEVPVIKELPIIREVPVVK 243 ++ VP+++++P+++++P++ +VP+++ Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLLE 35 >BC113474-1|AAI13475.1| 262|Homo sapiens cerebellar degeneration-related protein 1, 34kDa protein. Length = 262 Score = 29.9 bits (64), Expect = 2.7 Identities = 6/26 (23%), Positives = 24/26 (92%) Frame = +1 Query: 166 VQKVPIIKEVPVIKELPIIREVPVVK 243 ++ VP+++++P+++++P++ +VP+++ Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLLE 35 >BC113472-1|AAI13473.1| 262|Homo sapiens cerebellar degeneration-related protein 1, 34kDa protein. Length = 262 Score = 29.9 bits (64), Expect = 2.7 Identities = 6/26 (23%), Positives = 24/26 (92%) Frame = +1 Query: 166 VQKVPIIKEVPVIKELPIIREVPVVK 243 ++ VP+++++P+++++P++ +VP+++ Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLLE 35 >AL078639-1|CAI42370.1| 262|Homo sapiens cerebellar degeneration-related protein 1, 34kDa protein. Length = 262 Score = 29.9 bits (64), Expect = 2.7 Identities = 6/26 (23%), Positives = 24/26 (92%) Frame = +1 Query: 166 VQKVPIIKEVPVIKELPIIREVPVVK 243 ++ VP+++++P+++++P++ +VP+++ Sbjct: 10 LEDVPLLEDIPLLEDVPLLEDVPLLE 35 >D87076-1|BAA13245.2| 849|Homo sapiens KIAA0239 protein. Length = 849 Score = 29.1 bits (62), Expect = 4.7 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 11 RATKSFSSWLPRSP*AWLTL----CQSQSRLVTEKSHISGSTYLTKCILCTITTRTFRKC 178 + T+S + W+ S W+ C + +T+ SHI S + C LC T T +C Sbjct: 324 KPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQC 383 >BC021962-1|AAH21962.2| 791|Homo sapiens PHF15 protein protein. Length = 791 Score = 29.1 bits (62), Expect = 4.7 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 11 RATKSFSSWLPRSP*AWLTL----CQSQSRLVTEKSHISGSTYLTKCILCTITTRTFRKC 178 + T+S + W+ S W+ C + +T+ SHI S + C LC T T +C Sbjct: 265 KPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQC 324 >BC009307-1|AAH09307.2| 574|Homo sapiens PHF15 protein protein. Length = 574 Score = 29.1 bits (62), Expect = 4.7 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 11 RATKSFSSWLPRSP*AWLTL----CQSQSRLVTEKSHISGSTYLTKCILCTITTRTFRKC 178 + T+S + W+ S W+ C + +T+ SHI S + C LC T T +C Sbjct: 49 KPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQC 108 >AK074123-1|BAB84949.1| 639|Homo sapiens FLJ00195 protein protein. Length = 639 Score = 29.1 bits (62), Expect = 4.7 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 11 RATKSFSSWLPRSP*AWLTL----CQSQSRLVTEKSHISGSTYLTKCILCTITTRTFRKC 178 + T+S + W+ S W+ C + +T+ SHI S + C LC T T +C Sbjct: 342 KPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQC 401 >AJ251833-1|CAB94935.1| 576|Homo sapiens hypothetical protein protein. Length = 576 Score = 29.1 bits (62), Expect = 4.7 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Frame = +2 Query: 11 RATKSFSSWLPRSP*AWLTL----CQSQSRLVTEKSHISGSTYLTKCILCTITTRTFRKC 178 + T+S + W+ S W+ C + +T+ SHI S + C LC T T +C Sbjct: 50 KPTRSGTKWVHVSCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQC 109 >Y08806-1|CAA70044.1| 353|Homo sapiens EWS protein. Length = 353 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 201 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 240 >Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. Length = 656 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >X92120-1|CAA63088.1| 283|Homo sapiens CHOP,EWS protein. Length = 283 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 16 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 55 >X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. Length = 656 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. Length = 656 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >U35622-1|AAB03569.2| 478|Homo sapiens EWS protein/E1A enhancer binding protein chimera protein. Length = 478 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. Length = 655 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint region 1 protein. Length = 655 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint region 1 protein. Length = 655 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint region 1 protein. Length = 656 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein. Length = 354 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint region 1 protein. Length = 656 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to RNA-BINDING PROTEIN EWS. ). Length = 600 Score = 28.7 bits (61), Expect = 6.2 Identities = 12/47 (25%), Positives = 28/47 (59%) Frame = +3 Query: 114 QDPRTLRSAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 Q T ++YS+ P + +S+Y ++++ Q ++Y Q+ S + ++Y Sbjct: 130 QPAATAPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQGSYGQQSSY 176 >AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to RNA-BINDING PROTEIN EWS. ). Length = 661 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 199 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 238 >AF327066-1|AAK11227.1| 476|Homo sapiens Ewings sarcoma EWS-Fli1 (type 1) oncogene protein. Length = 476 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >AF254088-1|AAG09037.1| 609|Homo sapiens EWS/ZSG fusion protein long B isoform protein. Length = 609 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >AF254087-1|AAG09036.1| 713|Homo sapiens EWS/ZSG fusion protein long A isoform protein. Length = 713 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 >AF254086-1|AAG09035.1| 609|Homo sapiens EWS/ZSG fusion protein short isoform protein. Length = 609 Score = 28.7 bits (61), Expect = 6.2 Identities = 11/40 (27%), Positives = 27/40 (67%) Frame = +3 Query: 135 SAYSAPSPHARSESAYHKRSSCDQGAAYHQRSSGREDTAY 254 ++YS+ P + +S+Y ++++ Q ++Y Q+SS + ++Y Sbjct: 193 TSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSY 232 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 54,663,772 Number of Sequences: 237096 Number of extensions: 1102678 Number of successful extensions: 6336 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6191 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6331 length of database: 76,859,062 effective HSP length: 81 effective length of database: 57,654,286 effective search space used: 2363825726 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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