Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G11f
         (368 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   2.6  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   2.6  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   2.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   3.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   4.6  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   6.1  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 153 SPHARSESAYHKRSSCDQGAAYHQRSSGREDT 248
           S H  + +A H R SCD    ++       DT
Sbjct: 74  SKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 105


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 153 SPHARSESAYHKRSSCDQGAAYHQRSSGREDT 248
           S H  + +A H R SCD    ++       DT
Sbjct: 79  SKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 153 SPHARSESAYHKRSSCDQGAAYHQRSSGREDT 248
           S H  + +A H R SCD    ++       DT
Sbjct: 79  SKHGLTNTASHTRLSCDCDDKFYDCLKNSADT 110


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 153 SPHARSESAYHKRSSCDQGAA 215
           SP ARS S+  + S C Q A+
Sbjct: 677 SPPARSPSSQAQASQCPQTAS 697


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = -3

Query: 297 NVDCVHNGHRNRMNNRQCLHDRNFSDDRQ 211
           N  CV+N   + + N    +D N  ++++
Sbjct: 411 NTHCVNNNQNDNIQNTNNQNDNNQKNNKK 439


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 46  VAMSLANPLPEPEPFGHGKVT 108
           V   L  PLP P P   G+ T
Sbjct: 367 VTFDLDEPLPPPPPIRGGEWT 387


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,950
Number of Sequences: 438
Number of extensions: 2035
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)