Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G10f
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open readi...    29   5.5  
AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open readi...    29   5.5  
AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.                 29   5.5  
BC114953-1|AAI14954.1|  229|Homo sapiens ASB14 protein protein.        29   7.2  
AF403032-1|AAL57351.1|  302|Homo sapiens ankyrin repeat domain-c...    29   7.2  

>BC070260-1|AAH70260.1|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -1

Query: 416 YFAQQKPTVRFLRKLFALCIVYVGYVHLVLLTKECVF 306
           +    KP + F     +LC+ Y+GY+H +   K+ ++
Sbjct: 42  FIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLY 78


>AL096817-2|CAI18941.2|   97|Homo sapiens chromosome 6 open reading
           frame 162 protein.
          Length = 97

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -1

Query: 416 YFAQQKPTVRFLRKLFALCIVYVGYVHLVLLTKECVF 306
           +    KP + F     +LC+ Y+GY+H +   K+ ++
Sbjct: 42  FIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLY 78


>AF311339-1|AAK38513.1|  138|Homo sapiens DC18 protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -1

Query: 416 YFAQQKPTVRFLRKLFALCIVYVGYVHLVLLTKECVF 306
           +    KP + F     +LC+ Y+GY+H +   K+ ++
Sbjct: 42  FIKPNKPVMAFGLVTLSLCVAYIGYLHAIQENKKDLY 78


>BC114953-1|AAI14954.1|  229|Homo sapiens ASB14 protein protein.
          Length = 229

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 348 RICTSSSSY*RMCFLFRNNTNIIDFCQINEYTITSKKQVVLKDDYISVNLLLS 190
           +I     +Y  +  L R+  N+  FC++N     S  Q  LKD+ + + +LL+
Sbjct: 106 QIALRMGNYELISLLLRHGANVNYFCRVNPLHFPSALQYTLKDE-VMLRMLLN 157


>AF403032-1|AAL57351.1|  302|Homo sapiens ankyrin repeat
           domain-containing SOCS box protein Asb-14 protein.
          Length = 302

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -3

Query: 348 RICTSSSSY*RMCFLFRNNTNIIDFCQINEYTITSKKQVVLKDDYISVNLLLS 190
           +I     +Y  +  L R+  N+  FC++N     S  Q  LKD+ + + +LL+
Sbjct: 106 QIALRMGNYELISLLLRHGANVNYFCRVNPLHFPSALQYTLKDE-VMLRMLLN 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,414,143
Number of Sequences: 237096
Number of extensions: 943255
Number of successful extensions: 1285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)