Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G07f
         (429 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    49   4e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    48   1e-04
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    46   3e-04
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    46   3e-04
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    44   0.002
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;...    34   1.1  
UniRef50_Q9R589 Cluster: Beta-galactosidase; n=2; root|Rep: Beta...    34   1.1  
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    33   1.9  

>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 49.2 bits (112), Expect = 4e-05
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +2

Query: 320 PGYPIRPIVSRITISLAVVLQRRDWENPGVTQL 418
           PG P+       +++LAVVLQRRDWENPGVTQL
Sbjct: 11  PGDPLESTCRHASLALAVVLQRRDWENPGVTQL 43


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 47.6 bits (108), Expect = 1e-04
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +3

Query: 360 FHWPSFYNVVTGKTLALPNL 419
           +HWPSFYNVVTGKTLALPNL
Sbjct: 4   WHWPSFYNVVTGKTLALPNL 23


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 46.4 bits (105), Expect = 3e-04
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = +2

Query: 326 YPIRPIVSRITISLAVVLQRRDWENPGVTQL 418
           YP+   +S     LAVVLQRRDWENPGVTQL
Sbjct: 55  YPLVKALSESYYGLAVVLQRRDWENPGVTQL 85


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 46.4 bits (105), Expect = 3e-04
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +2

Query: 344 VSRITISLAVVLQRRDWENPGVTQL 418
           ++ IT SLAVVLQRRDWENPGVTQL
Sbjct: 1   MTMITDSLAVVLQRRDWENPGVTQL 25


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 43.6 bits (98), Expect = 0.002
 Identities = 19/19 (100%), Positives = 19/19 (100%)
 Frame = +2

Query: 362 SLAVVLQRRDWENPGVTQL 418
           SLAVVLQRRDWENPGVTQL
Sbjct: 21  SLAVVLQRRDWENPGVTQL 39


>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 195

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +2

Query: 329 PIRPIVSRITISLAVVLQRRDWENP 403
           P+   +  I  SLAVVLQRRDWENP
Sbjct: 167 PLLEKMLMILESLAVVLQRRDWENP 191


>UniRef50_Q9R589 Cluster: Beta-galactosidase; n=2; root|Rep:
           Beta-galactosidase - Escherichia coli
          Length = 23

 Score = 34.3 bits (75), Expect = 1.1
 Identities = 18/22 (81%), Positives = 18/22 (81%)
 Frame = +2

Query: 353 ITISLAVVLQRRDWENPGVTQL 418
           IT SLAVVLQR DW  PGVTQL
Sbjct: 3   ITDSLAVVLQRXDW-XPGVTQL 23


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +2

Query: 350 RITISLAVVLQRRDWENPGVTQ 415
           ++ +SL  +L RRDWENP +TQ
Sbjct: 10  QVQLSLPQILSRRDWENPQITQ 31


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,109,484
Number of Sequences: 1657284
Number of extensions: 3601445
Number of successful extensions: 6824
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6824
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)