Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G04f
         (316 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   6.2  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          20   8.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 101  FSVETKDPTIKIEKDSVYFRGEGAPDNRLHEVTIALYDTVLPEKSVFV 244
            F+     P + +E+ S  F G  +P N L   T+A+    +  KS+ V
Sbjct: 911  FATAASSPGL-LERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISV 957


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -2

Query: 303 QNGPSVFSFRNIISXHLPLFTKTLFSGRTVSYSAIVTSCSLLS 175
           Q+ PS+ S   I +  L  + +T F+G  ++      +C L++
Sbjct: 539 QSHPSIDSANTISNSSLQDYDETEFNGMELARYMGELNCDLIA 581


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 268 DITEGKNRWS 297
           DIT G N+WS
Sbjct: 45  DITFGVNKWS 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,233
Number of Sequences: 438
Number of extensions: 1588
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6719922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)