Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301G02f
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 48 3e-06
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 48 3e-06
Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 45 2e-05
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.2
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.2
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.2
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.2
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 27 5.1
AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical... 27 6.8
AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 51.2 bits (117), Expect = 4e-07
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 9 EAIHDGSLTARLVQDIQNFGGIITEDDLRNYRV-EWQEPIAIP-LTEQHTLYSVPLPGSG 182
+ + G + L ++ Q GG+ITE DL NY+V E+ + T+ P P S
Sbjct: 229 QLFYHGEMAKTLAKEFQEGGGLITEQDLANYKVREYVNSNSNDHFRGTLTMCGGPPPSSF 288
Query: 183 SVLAFILNMLRGWIGVDTVAPVGSD-LYWHRIVETFKYAYAKRTGLGDPSRHNLNQSILE 359
V I++ + + +D H+ +E K+AYA+RT LGD H+ + LE
Sbjct: 289 GVTQLIVSAMSKLFPEGHKDDIYNDPKVLHKYIEAMKFAYAQRTLLGD---HDFVKGALE 345
Query: 360 LEQNL 374
L +NL
Sbjct: 346 LSKNL 350
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 9 EAIHDGSLTARLVQDIQNFGGIITEDDLRNYRVEWQEP--IAIPLTEQHTLYSVPLPGSG 182
E + G + + +I + GG + E DL +Y + ++ L + + P P S
Sbjct: 256 ELFYKGGMAQTIAGEITDNGGFVNESDLASYETTIDDAPLLSTHLPGDYEMCGPPPPSSF 315
Query: 183 SVLAFILNMLRGWIGVDTVAPVGSDLYWHRIVETFKYAYAKRTGLGD 323
+ I+ ++ + D + L +HR++E K+AYA+RT LGD
Sbjct: 316 VITQNIIQVMAQYYK-DGQVDLDDPLVYHRLIEAEKFAYAQRTKLGD 361
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 48.4 bits (110), Expect = 3e-06
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +3
Query: 9 EAIHDGSLTARLVQDIQNFGGIITEDDLRNYRVEWQEP--IAIPLTEQHTLYSVPLPGSG 182
E + G + + +I + GG + E DL +Y + ++ L + + P P S
Sbjct: 286 ELFYKGGMAQTIAGEITDNGGFVNESDLASYETTIDDAPLLSTHLPGDYEMCGPPPPSSF 345
Query: 183 SVLAFILNMLRGWIGVDTVAPVGSDLYWHRIVETFKYAYAKRTGLGD 323
+ I+ ++ + D + L +HR++E K+AYA+RT LGD
Sbjct: 346 VITQNIIQVMAQYYK-DGQVDLDDPLVYHRLIEAEKFAYAQRTKLGD 391
>Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical
protein Y7A9A.1 protein.
Length = 607
Score = 45.6 bits (103), Expect = 2e-05
Identities = 31/105 (29%), Positives = 54/105 (51%)
Frame = +3
Query: 9 EAIHDGSLTARLVQDIQNFGGIITEDDLRNYRVEWQEPIAIPLTEQHTLYSVPLPGSGSV 188
+ ++GS+ +++++ GGIIT DDLRNYR E + L ++ + P P S ++
Sbjct: 266 QLFYNGSIADGIIREMLANGGIITIDDLRNYRTHVMETLYADL-GKYRICGPPPPSSWAI 324
Query: 189 LAFILNMLRGWIGVDTVAPVGSDLYWHRIVETFKYAYAKRTGLGD 323
I ++ + D ++ Y H ++E K AY +R LGD
Sbjct: 325 TQAIPRIV-ARLYRDKKMFNDAEFY-HTLIEAEKLAYGQRGQLGD 367
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 45.2 bits (102), Expect = 2e-05
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Frame = +3
Query: 18 HDGSLTARLVQDIQNFGGIITEDDLRNYRVEWQEPIAIPLTEQHTLYSV--PLPGSGSVL 191
+ G L +L ++ + GGII D +NY+ + + T+ V P P SGS +
Sbjct: 299 YTGRLAEQLAKEFEANGGIIRLQDFKNYKSIVHDSKNVIYTKLKNGRGVCGPPPPSGSAV 358
Query: 192 A-FILNMLRGW-IGVDTVAPVGSDLYWHRIVETFKYAYAKRTGLGDP 326
A ILN++ G+ + + + + LY H +E+ K++YA R+ LGDP
Sbjct: 359 AQAILNVMDGFEYNMKSFNEIAT-LY-HHFLESSKFSYAARSWLGDP 403
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1890 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1920
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1902 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1932
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1788 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1818
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1789 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1819
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1871 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1901
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1890 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1920
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1902 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1932
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1788 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1818
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1789 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1819
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1871 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1901
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1902 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1932
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1902 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1932
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 6 PEAIHDGSLTARLVQDIQNFGGIITEDDLRN 98
PEA+H+G LT R+ I N GI + +N
Sbjct: 1902 PEAVHEGLLTKRVRHSIFNIRGIRNTETSQN 1932
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 252 SDLYWHRIVETFKYAYAKRTGLGDPSRHNLNQSI 353
S WH +VE K Y KR LG+ + SI
Sbjct: 127 SSTVWHTLVEQTKEEYKKRQSLGELYGKQMTASI 160
>AL132862-31|CAB70234.1| 485|Caenorhabditis elegans Hypothetical
protein Y73F8A.34a protein.
Length = 485
Score = 27.1 bits (57), Expect = 6.8
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 256 SEPTGATVSTPIHPRSMFSINA--STEPEPGRGTEYSVCCSVSGIAIGSC 113
S+ T + P++ S A S+ P PG E VCCS++ ++ +C
Sbjct: 90 SDTTEFLAEAQVIPKTSSSEEAAGSSAPPPGGDAECDVCCSMTRLSGLAC 139
>AL110479-6|CAB54354.2| 447|Caenorhabditis elegans Hypothetical
protein Y105C5B.8 protein.
Length = 447
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 159 SVPLPGSGSVLAFILNMLRGWIGVDTVAPVGSDLYWHRIVETFKYAYAKRTGLG 320
SVP+ S + +++ LR W G AP+ D YW + +T+ + + G
Sbjct: 275 SVPVYVFFSPIMWMIT-LRRWKGRVNPAPIEPDDYWKILTDTWNQVFNSKNDSG 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,697,748
Number of Sequences: 27780
Number of extensions: 217003
Number of successful extensions: 579
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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