Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G02f
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   1.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   2.9  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    22   3.8  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   5.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.8  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = +1

Query: 334 TTLTKVFLS*SKTLQMLSGLPXYRGRVDDTRTYNDWK 444
           TT+ ++ +  +  ++++  L  +   +D+TR Y + K
Sbjct: 324 TTVHRICIGETMPMELIENLRNHPEYIDETRNYQECK 360


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 183  SPSRAGAPNIACVAP 139
            SP  AGAPN+  + P
Sbjct: 1172 SPFMAGAPNVPTILP 1186


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 24  GSLTARLVQDIQNFGGIITEDDLRNYRVEWQEPI 125
           GS+T R         G+    +++NY ++W + I
Sbjct: 82  GSVTLRQEYKNIKLYGLTKNLEIKNYNIDWDKCI 115


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -1

Query: 367 CSNSRILWLRL*REGSPRPVRFAYAYLKVS 278
           C    I W++  +EG  R +   Y +  V+
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGVA 70


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 142 SVSGIAIGSCHSTL*FRR 89
           SVSG A+  CH+ +  RR
Sbjct: 308 SVSGGALNDCHAEVVARR 325


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 260 ILASHRRNLQIRVREANRPR 319
           ++AS  RNL+    E  RPR
Sbjct: 224 VIASRHRNLEATESENVRPR 243


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = +1

Query: 418 DTRTYNDWKHYE 453
           D   Y DW+H++
Sbjct: 855 DPAVYEDWRHWK 866


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,568
Number of Sequences: 438
Number of extensions: 3101
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)