Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G01f
         (468 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical pr...    31   0.31 
U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical pr...    31   0.31 
AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical...    31   0.54 
Z78546-6|CAB54307.1|  642|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z78545-5|CAB01764.2|  642|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z32683-4|CAA83629.1|  443|Caenorhabditis elegans Hypothetical pr...    29   1.3  
AL022271-1|CAA18349.1|  919|Caenorhabditis elegans Hypothetical ...    29   1.7  
U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC024765-8|AAF60530.1|  165|Caenorhabditis elegans Hypothetical ...    29   2.2  
U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase ...    28   2.9  
U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase ...    28   3.8  
AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threon...    28   3.8  
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z22176-5|CAA80134.1|  278|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF099917-1|AAC68784.2|  188|Caenorhabditis elegans Hypothetical ...    27   6.7  
AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily a...    27   8.9  

>U41625-2|ABS19463.1|  584|Caenorhabditis elegans Hypothetical
           protein K03A1.2b protein.
          Length = 584

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 25/87 (28%), Positives = 45/87 (51%)
 Frame = -2

Query: 362 ADDEILAEIKKCQTELTAVRKENCRNLKNLIGLCKQEMIRLNLKKQLDQVDLECIDIYKK 183
           AD+    ++KK   ELTA + E+    K+L  +  +E   ++  +Q D  D++ +   K 
Sbjct: 32  ADNSKKVKVKKA--ELTAAQDEDDEGSKSLDEV--EEDAGIDDDEQDDDEDVKEVPKKKS 87

Query: 182 MVAAKQKKRPVTKKEKEDAWKAINEQI 102
            V  K+ K+P  KK+K    K  +++I
Sbjct: 88  HVKQKKSKKPPAKKDKTRKSKKNDQEI 114


>U41625-1|AAA83325.2|  586|Caenorhabditis elegans Hypothetical
           protein K03A1.2a protein.
          Length = 586

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 25/87 (28%), Positives = 45/87 (51%)
 Frame = -2

Query: 362 ADDEILAEIKKCQTELTAVRKENCRNLKNLIGLCKQEMIRLNLKKQLDQVDLECIDIYKK 183
           AD+    ++KK   ELTA + E+    K+L  +  +E   ++  +Q D  D++ +   K 
Sbjct: 32  ADNSKKVKVKKA--ELTAAQDEDDEGSKSLDEV--EEDAGIDDDEQDDDEDVKEVPKKKS 87

Query: 182 MVAAKQKKRPVTKKEKEDAWKAINEQI 102
            V  K+ K+P  KK+K    K  +++I
Sbjct: 88  HVKQKKSKKPPAKKDKTRKSKKNDQEI 114


>AF040645-14|AAB94979.1|  779|Caenorhabditis elegans Hypothetical
           protein F52C6.14 protein.
          Length = 779

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
 Frame = -2

Query: 374 LTNPADDEILAEIKKCQTE---LTAVRKENCRNLKNLIGLCKQEMIRLNLKKQLDQVDLE 204
           L+NPA   I+ E KK   E   L  +  ++ RNLK+ +GL ++++ +++L+    +V LE
Sbjct: 179 LSNPA---IVEEAKKSSNEFSKLFCLLPQDIRNLKDSLGLNQEQLDKVDLESVKKRVQLE 235


>Z78546-6|CAB54307.1|  642|Caenorhabditis elegans Hypothetical
           protein M03B6.3 protein.
          Length = 642

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
 Frame = -2

Query: 392 PEDLPPLTNPADDEILAEIKKCQTELTAVRKENCRNLKNLIGLCKQEMIRLNL---KKQL 222
           P  + PL +PA DE++  ++        V  ++ + L+N++   +Q +    L   +KQL
Sbjct: 239 PGYMQPL-DPAIDEVVTNLRTKGAYGLGV--DDVKRLQNILQTYEQTLQTKELLTRRKQL 295

Query: 221 DQVDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEI-NALPQTGPN 57
           + +  E  +   K+   K+ +  + KKEK+   +    + RL +++ N     GPN
Sbjct: 296 EVLQTELTEQRMKIEVQKKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHSSFGPN 351


>Z78545-5|CAB01764.2|  642|Caenorhabditis elegans Hypothetical
           protein M03B6.3 protein.
          Length = 642

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
 Frame = -2

Query: 392 PEDLPPLTNPADDEILAEIKKCQTELTAVRKENCRNLKNLIGLCKQEMIRLNL---KKQL 222
           P  + PL +PA DE++  ++        V  ++ + L+N++   +Q +    L   +KQL
Sbjct: 239 PGYMQPL-DPAIDEVVTNLRTKGAYGLGV--DDVKRLQNILQTYEQTLQTKELLTRRKQL 295

Query: 221 DQVDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEI-NALPQTGPN 57
           + +  E  +   K+   K+ +  + KKEK+   +    + RL +++ N     GPN
Sbjct: 296 EVLQTELTEQRMKIEVQKKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHSSFGPN 351


>Z32683-4|CAA83629.1|  443|Caenorhabditis elegans Hypothetical
           protein R07E5.6 protein.
          Length = 443

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/51 (29%), Positives = 32/51 (62%)
 Frame = -2

Query: 233 KKQLDQVDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEIN 81
           KK+ +++D E   I K++  A++KK+   +K +++  K   EQ+ +N E++
Sbjct: 263 KKEKERIDKE-EKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSINPEMS 312


>AL022271-1|CAA18349.1|  919|Caenorhabditis elegans Hypothetical
           protein F32F2.1 protein.
          Length = 919

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = -1

Query: 165 KEAPCY*EGKRRCLESNK*TNKAKQRNQCFATNGSKFKLDISVRHDTKITC 13
           K+ P Y E +R+ +++ + +N+ +  +      GSK  +   ++ + K TC
Sbjct: 575 KKVPKYLEKRRKSVDAKEESNRRRSLSASRLLGGSKTSISEPIKEEQKCTC 625


>U53336-7|AAA96179.1|  642|Caenorhabditis elegans Hypothetical
           protein K07C11.9 protein.
          Length = 642

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 266 LC-KQEMIRLNLKKQLDQVDLECIDIYKKMVAAKQKKRPVTKK 141
           LC K      NL KQ++ V  + +D+ +K  + K+KK  +  +
Sbjct: 88  LCVKMNSTCTNLSKQMETVKFKSVDLVQKTASLKEKKASIESR 130


>AC024765-8|AAF60530.1|  165|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.8 protein.
          Length = 165

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 20/79 (25%), Positives = 36/79 (45%)
 Frame = -2

Query: 299 ENCRNLKNLIGLCKQEMIRLNLKKQLDQVDLECIDIYKKMVAAKQKKRPVTKKEKEDAWK 120
           ENCR LK+   +        NLK +L    +  + + K     K+KK+ + K +K+   K
Sbjct: 15  ENCRKLKSKKSIIHLHRFSKNLKNKL---PIYFVSVSKG--GDKKKKKDIKKIDKDADKK 69

Query: 119 AINEQIRLNKEINALPQTG 63
            + + +     +   P+TG
Sbjct: 70  KVVKSVEKTARMPDKPETG 88


>U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase
           family protein 1 protein.
          Length = 377

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -2

Query: 317 LTAVRKENCRN-LKNLIGLCKQEMIRLNLKKQLDQVDLECIDIYKKMVAAKQKKRPVTKK 141
           L  +  E  RN ++NL      +M R + K+   Q   + ID+ +KM+     +RP  K+
Sbjct: 258 LKKISSEEARNYIRNL-----PKMTRRDFKRLFAQATPQAIDLLEKMLHLDPDRRPTAKE 312

Query: 140 EKEDAWKA 117
             E  + A
Sbjct: 313 AMEHEYLA 320


>U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase
           protein 29 protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 215 VDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEINAL 75
           V +EC D  +KM+     KR   +   +  W  I + ++ N+    L
Sbjct: 236 VSVECADFIRKMLVLNPGKRYTIQNVLQHRWMHIRDDVQKNQAAQLL 282


>AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threonine
           kinase KIN-29 protein.
          Length = 822

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 215 VDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEINAL 75
           V +EC D  +KM+     KR   +   +  W  I + ++ N+    L
Sbjct: 236 VSVECADFIRKMLVLNPGKRYTIQNVLQHRWMHIRDDVQKNQAAQLL 282


>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
           protein C27H6.1 protein.
          Length = 1657

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 197 DIYKKMVAAKQKKRPVTKKEKED-AWKAINEQIRLNKEINALPQT 66
           D+  KM  A++K R   KKEKE+ A  A N+ +   K  N + ++
Sbjct: 242 DMEDKMEQAEEKARKEEKKEKEETAEVAQNDDVTTEKHQNEVEKS 286


>Z22176-5|CAA80134.1|  278|Caenorhabditis elegans Hypothetical
           protein ZK1098.6 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 245 RLNLKKQLDQVDLECIDIYKKMVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEINALPQT 66
           R  LKK++DQ   E +   KK    K   + + KK + +     +E +   K++N + +T
Sbjct: 98  RDELKKKVDQKSKETVHWTKKYYKLKAYGQEILKKRENEIKLLKSEVVDGKKKLNEIVET 157


>AF099917-1|AAC68784.2|  188|Caenorhabditis elegans Hypothetical
           protein F54D10.4 protein.
          Length = 188

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
 Frame = -2

Query: 383 LPPLTNPADDEILAEIKKCQTEL---TAVRKENCRNLKNLIGLCKQEMIRLNLKKQLDQV 213
           LPPL+   DD     +K  Q +    T    ENC NLKNL     +   +L  K+   QV
Sbjct: 34  LPPLST--DDVRFFTVKSEQIKKRKKTGKIPENCENLKNLEQELTETKSKLAKKEMEHQV 91

Query: 212 DLECIDIYKKMVAAKQKKRPVTKKEKE 132
            L+    Y K+   K ++  + +  K+
Sbjct: 92  LLQA---YTKIAKEKDEEPTLEQSLKQ 115


>AF106580-3|AAC78205.1|  881|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 268 protein.
          Length = 881

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
 Frame = -2

Query: 428 LRKELVEQGILDPEDLPPLTNPADDEILAEIKKCQTELTAVRKENCRNLKNLI-GLCKQE 252
           LR     +    P   PPL +P D     E +  +   T+   E C +L++ I  L ++ 
Sbjct: 601 LRDVTTLESSFTPPPPPPLESPTDSTSSKENESVKPAKTSTNYEMCNDLESYITSLTRKR 660

Query: 251 MIRLNLKKQLDQVDLECIDIYKKMVAAKQKKRP 153
              L      ++  L  +   K  +A K +K P
Sbjct: 661 ASHLPKAPPKEEPKLPEVLPEKSKIALKIEKIP 693


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,157,298
Number of Sequences: 27780
Number of extensions: 161515
Number of successful extensions: 635
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)