Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F12f
(399 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 224 2e-59
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 222 7e-59
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 217 4e-57
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.34
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.44
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 4.1
02_05_0844 - 32144417-32144764,32145588-32145686,32146218-321464... 27 4.1
05_01_0378 + 2970528-2971008,2971961-2972036,2972108-2972253,297... 27 5.5
02_03_0106 + 15292869-15296138 27 5.5
06_01_1092 + 8966584-8967053,8967737-8967854,8968030-8968253,896... 27 7.2
04_04_1108 + 30961600-30962013,30963131-30964465 27 7.2
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 26 9.5
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 26 9.5
07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371 26 9.5
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 26 9.5
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 26 9.5
05_04_0070 + 17643945-17644002,17644173-17644775,17645376-176455... 26 9.5
04_03_0635 + 18215241-18215489 26 9.5
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 26 9.5
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 224 bits (547), Expect = 2e-59
Identities = 100/131 (76%), Positives = 113/131 (86%)
Frame = +3
Query: 3 YRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 182
YR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+FP CVHLVS E E +SSEALEA
Sbjct: 9 YRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAA 68
Query: 183 RICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVAR 362
RI CNKY+ KN GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT AR
Sbjct: 69 RIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCAR 128
Query: 363 VRIGQPIMSXR 395
V IGQ ++S R
Sbjct: 129 VDIGQVLLSVR 139
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 222 bits (543), Expect = 7e-59
Identities = 99/131 (75%), Positives = 113/131 (86%)
Frame = +3
Query: 3 YRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 182
YR KNKPYPKSR+CRGVPDPKIRIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA
Sbjct: 316 YRQIKNKPYPKSRYCRGVPDPKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAA 375
Query: 183 RICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVAR 362
RI CNKY+ K+ GKD FH+R+ HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT AR
Sbjct: 376 RIACNKYMAKHAGKDAFHLRVCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCAR 435
Query: 363 VRIGQPIMSXR 395
VRIGQ ++S R
Sbjct: 436 VRIGQVLLSVR 446
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 217 bits (529), Expect = 4e-57
Identities = 97/131 (74%), Positives = 112/131 (85%)
Frame = +3
Query: 3 YRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 182
YR KNKPYPKSR+CRGVPDPKIRI+D+G K+ VD+F CVHLVS E E ++SEALEA
Sbjct: 5 YRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAA 64
Query: 183 RICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVAR 362
RI CNKY+ K+ GKD FH+R+R+HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT AR
Sbjct: 65 RIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCAR 124
Query: 363 VRIGQPIMSXR 395
V IGQ ++S R
Sbjct: 125 VDIGQVLLSVR 135
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.34
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 102 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 221
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 30.7 bits (66), Expect = 0.44
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 382 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 290
+ CP+ + + VP LP++P P++S ++P +
Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 4.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 208 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 107
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
>02_05_0844 -
32144417-32144764,32145588-32145686,32146218-32146410,
32147049-32147107,32147189-32147263,32147557-32147670,
32147776-32147895,32148204-32148216,32148421-32148512,
32149078-32149164,32149254-32149328,32149630-32149680,
32149852-32149947,32150135-32150221,32150312-32150368,
32150475-32150600,32150709-32150949,32151028-32151114,
32151260-32151637,32152847-32153187
Length = 912
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 120 VESRQRSLSSYPNRRYGSWDQVHPDRTSISDTVYFCSTG 4
+ S + + S GSW H D +++ DT+ CS+G
Sbjct: 758 MNSSNQQIGSPSEEDLGSWGH-HSDPSTVPDTILQCSSG 795
>05_01_0378 +
2970528-2971008,2971961-2972036,2972108-2972253,
2972300-2972817
Length = 406
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 281 NVIMRWS**APDWDAWCVWQASGYCSTCSHWT 376
NV+ RW P AWC + S + CS W+
Sbjct: 342 NVLGRWGH-GPVPGAWCSGRKSWFSDPCSQWS 372
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -3
Query: 247 LMRIWN*SFPQFFTRYLLQQIRPASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKI 74
L+ W+ +FP++ LL + R EL CS S C GK+ ++ +P+ +I
Sbjct: 1008 LIIFWSIAFPRWLE--LLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRI 1063
>06_01_1092 +
8966584-8967053,8967737-8967854,8968030-8968253,
8968352-8968588,8969122-8969275,8969356-8969438,
8969573-8969687,8969837-8969909,8970005-8970147
Length = 538
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = -3
Query: 151 SYSSDTKCTHSGKSSTVALFLPKSKIRILGSGTPRQNLDFGYG 23
S D + T++ +SS++ + L + ++++ + R+NLDF +G
Sbjct: 230 SKQCDYEITYADRSSSMGI-LARDNMQLITADGERENLDFVFG 271
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 195 CSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSS 91
C + PP PL++ V + P+A + S + +++S
Sbjct: 103 CGAEIAPPPPLAAVVSVVAPPAAIPITSNRPAMTS 137
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 26.2 bits (55), Expect = 9.5
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 189 RYVLPPKPLSSAVHIRRTP--SARTVESRQR--SLSSYPNRRYGSWDQVHPDRTSISDTV 22
R LP PLS + +P S R + SR R SLS P+RR S + DR S
Sbjct: 273 RTSLPDHPLSHSRGGSPSPPISGRDMGSRGRRQSLSPTPSRRASSSHSIERDRLSSYSKA 332
Query: 21 YFCSTG 4
S+G
Sbjct: 333 SATSSG 338
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 200 VPRKELRKGSVPYPHETSPFPRYP 271
+PRK + +G+V E P PRYP
Sbjct: 23 LPRKTMPEGTVVRAGELRPRPRYP 46
>07_03_1497 - 26990647-26991531,26991609-26991967,26992302-26992371
Length = 437
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 9 YCKNKPYPKSRFCRGVPDPKIRIFDL--GKKRATVDDFPLCVHLVSDEYEQLSSE 167
+CK+ P KS + G+P P FD+ GK R ++ L +V+D + + E
Sbjct: 141 HCKDHPRAKSLY--GIPFPYFDTFDVIYGKDRTGREEEELSDEVVADMENENTDE 193
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 116 KVVNGRSLLTQIEDTDLGIRYTPTEP 39
+V+NG+ ++ +IE+ D Y P P
Sbjct: 211 QVINGQDIVQEIEEVDTDEHYQPKTP 236
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 9 YCKNKPYPKSRFCRGVPDPKIRIFDLGKKRA 101
+C +PYPK VPD ++ GK +A
Sbjct: 395 FCMYEPYPKGSLEDDVPDTTVQDMLCGKAKA 425
>05_04_0070 +
17643945-17644002,17644173-17644775,17645376-17645579,
17646480-17647009
Length = 464
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 195 NKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQG-TVARVRI 371
+KY++ + H + H+IR N+ L+ +G + L T + + G Q RV +
Sbjct: 117 DKYVITGFEQGHTHAFVSPDKRHLIRSNRKLTLSGRNTLLTCHKASIGTSQAYRYLRVGV 176
Query: 372 G 374
G
Sbjct: 177 G 177
>04_03_0635 + 18215241-18215489
Length = 82
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -1
Query: 261 GKGEVSCGYG---TDPFRSSLRGTYCSRYVL 178
G+GE+ GYG P RS++ T SR VL
Sbjct: 28 GRGEIKAGYGDVWRQPARSAMDRTKSSRCVL 58
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 192 SRYVLPPKPLSSAVHIRRTPSARTVES 112
S + PP P SSA + RT SA TV S
Sbjct: 18 SDQLAPPPPPSSAQSLSRTASAETVLS 44
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,442,886
Number of Sequences: 37544
Number of extensions: 270996
Number of successful extensions: 831
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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