Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F11f
         (431 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    211   3e-55
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   211   3e-55
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   211   3e-55
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   204   3e-53
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   204   3e-53
L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    31   0.67 
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    31   0.67 
AY069798-1|AAL39943.1|  172|Drosophila melanogaster SD03580p pro...    28   6.2  
AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p pro...    28   6.2  
AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB...    28   6.2  
AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA...    28   6.2  
AE014296-116|AAN11446.1|  172|Drosophila melanogaster CG32345-PA...    28   6.2  
AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA ...    27   8.2  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  211 bits (515), Expect = 3e-55
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 43  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 222
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 223 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 402
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 403 IIXSGPRED 429
           II SGPRED
Sbjct: 140 IINSGPRED 148


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  211 bits (515), Expect = 3e-55
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 43  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 222
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 223 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 402
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 403 IIXSGPRED 429
           II SGPRED
Sbjct: 140 IINSGPRED 148


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  211 bits (515), Expect = 3e-55
 Identities = 100/129 (77%), Positives = 113/129 (87%)
 Frame = +1

Query: 43  AEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGR 222
           AE    ++ET ++    ++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGR
Sbjct: 21  AEVAETILET-NVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGR 79

Query: 223 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 402
           YA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+A
Sbjct: 80  YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSA 139

Query: 403 IIXSGPRED 429
           II SGPRED
Sbjct: 140 IINSGPRED 148


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  204 bits (499), Expect = 3e-53
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = +1

Query: 19  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 198
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 199 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 378
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 379 PLQVLVTAIIXSGPRED 429
           PLQV V AI+ SGPRED
Sbjct: 134 PLQVTVNAIVNSGPRED 150


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  204 bits (499), Expect = 3e-53
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = +1

Query: 19  EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 198
           +E+W DDV       V TM   +  + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+
Sbjct: 21  QEDWADDV-------VTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFAR 73

Query: 199 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGEN 378
           YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT EN
Sbjct: 74  YLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSEN 133

Query: 379 PLQVLVTAIIXSGPRED 429
           PLQV V AI+ SGPRED
Sbjct: 134 PLQVTVNAIVNSGPRED 150


>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 201 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 97
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 201 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 97
           IF ++LF    ++   +R++H + TPSA+K  + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366


>AY069798-1|AAL39943.1|  172|Drosophila melanogaster SD03580p
           protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 249 PVPNRGAPYKLSNDARSEQWQKTDGRTYCQT 341
           P P+ G P K S     E+W  T  +TYCQ+
Sbjct: 114 PPPSTGRPPKRSPKPSQERWGST--KTYCQS 142


>AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p
           protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 265 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 366
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250


>AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB,
           isoform B protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 265 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 366
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 125 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 158


>AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA,
           isoform A protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 265 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 366
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250


>AE014296-116|AAN11446.1|  172|Drosophila melanogaster CG32345-PA
           protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 249 PVPNRGAPYKLSNDARSEQWQKTDGRTYCQT 341
           P P+ G P K S     E+W  T  +TYCQ+
Sbjct: 114 PPPSTGRPPKRSPKPSQERWGST--KTYCQS 142


>AE013599-13|EAA46165.2|  308|Drosophila melanogaster CG40130-PA
           protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = +2

Query: 77  LYHKPPTFLKSSFSADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMHTSVSVKP 250
           LY  PP+ L  S SA  +   C SLIC C      + S + + ++   G+  +++ +P
Sbjct: 102 LYRLPPSSLLKSSSALRLQH-CASLICECLAKQKTEFSIRPLGILYGDGVQNTINTEP 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,895,001
Number of Sequences: 53049
Number of extensions: 412710
Number of successful extensions: 1078
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)