Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F10f
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ535393-1|ABF83336.1|  127|Homo sapiens circulating B cell anti...    29   7.3  
AY781845-1|AAW29147.1|  135|Homo sapiens AF1 non-allergic IgE he...    29   9.7  

>DQ535393-1|ABF83336.1|  127|Homo sapiens circulating B cell
           antibody heavy chain variable region protein.
          Length = 127

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 22/63 (34%), Positives = 27/63 (42%)
 Frame = +3

Query: 327 ISMIYSIINRYINPFLKISK*NRVFCMKDTSKLSISIKINMHLT*PNLTKYQGTCADFYI 506
           I  IY     Y NP LK    +RV    DTSK   S+K+N          Y  T  D YI
Sbjct: 52  IGSIYYSGRTYYNPSLK----SRVTISVDTSKNQFSLKLNSVTAADTAVYYCATQRDTYI 107

Query: 507 XLL 515
            ++
Sbjct: 108 AVI 110


>AY781845-1|AAW29147.1|  135|Homo sapiens AF1 non-allergic IgE heavy
           chain IGHV4-31 protein.
          Length = 135

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 18/40 (45%), Positives = 21/40 (52%)
 Frame = +3

Query: 327 ISMIYSIINRYINPFLKISK*NRVFCMKDTSKLSISIKIN 446
           I  IY   N Y NP LK    +RV    DTSK   S+K+N
Sbjct: 50  IGYIYDSGNTYYNPSLK----SRVTISVDTSKNQFSLKLN 85


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,614,281
Number of Sequences: 237096
Number of extensions: 1047052
Number of successful extensions: 1069
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)