Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F09f
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1117 - 34633311-34634030,34634434-34634873,34635320-346353... 43 2e-04
02_02_0246 - 8243584-8243696,8243848-8244415,8244500-8244685,824... 40 0.001
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510... 34 0.059
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 33 0.10
01_01_1100 + 8716853-8716860,8717739-8717844,8717931-8718015,871... 33 0.14
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 33 0.18
06_03_0433 - 20718726-20719895 32 0.24
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 32 0.24
04_04_1488 - 33922253-33922361,33922459-33922649,33922752-339241... 31 0.55
08_02_0371 + 16365528-16365728,16366471-16366812 31 0.73
12_02_1038 - 25596027-25596393,25596492-25596660,25597283-255973... 30 0.96
05_03_0439 + 14028234-14028287,14029394-14029468,14029562-140296... 30 0.96
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198... 30 0.96
01_05_0286 - 20403748-20403828,20404493-20404693,20404774-204049... 30 0.96
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 30 1.3
05_01_0128 + 866817-866859,867789-867874,868142-868231,868337-87... 30 1.3
03_05_0394 + 23758392-23758625,23759097-23759273,23759349-237594... 29 1.7
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 1.7
09_06_0059 - 20584196-20584288,20584389-20585055,20585411-205857... 29 2.2
08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811 29 2.2
03_04_0216 + 18695292-18696139,18696217-18696339,18697027-186972... 29 2.2
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 29 2.2
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 29 2.9
11_02_0123 - 8550193-8550213,8550434-8550682,8550787-8550834,855... 29 2.9
02_05_0583 + 30128795-30129158,30129342-30129505,30129602-301296... 29 2.9
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 28 3.9
08_01_0874 + 8575718-8576422,8576603-8576662,8576799-8576945,857... 28 3.9
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 28 3.9
03_06_0448 - 34005581-34005655,34005735-34005830,34006669-340076... 28 3.9
02_05_0611 + 30344637-30344652,30344743-30344883,30345258-303455... 28 3.9
02_05_0073 - 25602268-25603182,25603273-25604190 28 3.9
11_06_0294 + 22022630-22024006,22024109-22024234,22024319-220244... 28 5.1
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464... 28 5.1
03_01_0050 + 430744-431337,432131-432249,432539-433084,433177-43... 28 5.1
10_08_1045 - 22535516-22535593,22535681-22535756,22535843-225359... 27 6.8
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784... 27 6.8
06_01_0405 + 2897802-2898126,2898206-2898430,2898541-2898683,289... 27 6.8
03_06_0722 - 35751490-35754357 27 6.8
02_05_1090 - 34027737-34028582 27 6.8
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 27 8.9
04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744 27 8.9
03_04_0174 - 18044516-18046327 27 8.9
01_01_0051 + 389051-389623 27 8.9
>01_06_1117 -
34633311-34634030,34634434-34634873,34635320-34635370,
34635522-34635642
Length = 443
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/153 (22%), Positives = 65/153 (42%)
Frame = +1
Query: 49 VTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLR 228
VTS H + HQ + + + + ++ SK D+ S ++ SSS S+ R +
Sbjct: 239 VTSGSHTVKGHQRSSRKSHYKYKPAKSSSSRSSSGSKKDRKHSRHSSSSSSSSNHKRDRK 298
Query: 229 GESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHH 408
V S+++ R+ +Q+ + S+ G ++ ++ Q + +
Sbjct: 299 PSYRNTVGGVSVGSSSSSRNTDASAAQYRDLYSS------SGGNRIDIAVPQYSKLSPLV 352
Query: 409 TSENKAQRNINSTTYITSGSRVEQNVTSAQHLS 507
SE+ RN+ ++ TSGSR + V LS
Sbjct: 353 PSESATYRNVYNS---TSGSRTDPTVPHCSKLS 382
>02_02_0246 -
8243584-8243696,8243848-8244415,8244500-8244685,
8244772-8244804,8244901-8244999,8245091-8245330,
8246130-8246447,8246589-8246646,8246788-8246846,
8246888-8246960,8247004-8247219,8247326-8247495
Length = 710
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Frame = +1
Query: 178 HYTQHSSSDSHVN----------RQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDS 327
HYT+H+S DS N RQL GE+T+ S +++S+ +++K H + +
Sbjct: 524 HYTEHTSRDSSNNTPVFGGDRYSRQLLGEATRSSASENENSS-----MTDKEENHDEVHT 578
Query: 328 NVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQNVT 489
N + R + + N +S +QR +N+T S + E+N+T
Sbjct: 579 NCEIKKR--------TEEHCIQINSEDSSSTYSQRTMNATVQTGSPHKTEENIT 624
>04_04_1696 +
35448667-35449641,35449726-35450562,35450667-35451001,
35451371-35451497,35451594-35451752,35451872-35453053,
35453164-35453424,35453513-35453761
Length = 1374
Score = 34.3 bits (75), Expect = 0.059
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Frame = +1
Query: 70 ITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRV 249
+TS Q T H+N ++ T Q S TL+ H ++ + + Q+ ++ Q++
Sbjct: 467 VTSSQDTTGHQNEQDTETSQETASDTLTK------DHSCEYMDQLNDLQEQVFAKTNQKM 520
Query: 250 LSSDQSSTTNQRHVSEKHSQHSTIDSNVNR--QVREGSSQRIVSSDQVASTNQHHTSENK 423
D T + E++ I+S+ + V + S I+ S Q T Q E+
Sbjct: 521 SQPDPFGTEKHQQNVEQYRAGENINSDTDEADDVMDSQSILILLSSQCV-TKQVVCEESH 579
Query: 424 AQRNINSTTYITSGSRVEQNVTSAQHLS 507
R + S R Q++ Q+LS
Sbjct: 580 LYRINYYGNFDVSLGRYLQDILQNQNLS 607
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 33.5 bits (73), Expect = 0.10
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Frame = +1
Query: 25 RHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSD 204
R ++ +SS+ +S ++ + SES T + S+ LSS +D +HS D
Sbjct: 224 RRRRKKKRYSSSESESSSESESELSDSDSESDTCSS-DSSDLSSSSDDRRRRRKRHSKKD 282
Query: 205 SHV----NRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTI-DSNV--NRQVREGSSQ 363
H R R E +R D+ S + + E S+ + DS++ ++ R +
Sbjct: 283 KHKRGKRKRDRRRERKRR--KRDRKSKQKSKRMLESDSETGNVSDSSLEDDKSKRHHRGR 340
Query: 364 RIVSSDQVASTNQHHTS 414
+ +S QV+ N HT+
Sbjct: 341 KSKASSQVSGEN--HTA 355
>01_01_1100 +
8716853-8716860,8717739-8717844,8717931-8718015,
8718632-8718715,8718969-8719073,8719621-8719898
Length = 221
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/97 (27%), Positives = 43/97 (44%)
Frame = +1
Query: 133 IGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQH 312
+GS T SSK +S T+ + NR +G S Q + QS+ +H ++ +
Sbjct: 118 LGSLTPSSKKSAGSSKKTRSRFTSGSKNRSSQG-SAQSL--GQQSAEPAHKHNQKRKDES 174
Query: 313 STIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENK 423
S SNV+ + EGS R S + Q ++K
Sbjct: 175 SLGHSNVSGKSAEGSQVRGGDSGTTSEVPQTPVEKSK 211
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 32.7 bits (71), Expect = 0.18
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 13/148 (8%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTL----SSKTDQ 168
+ D+D + +H + HG + ++HK S+ + + T S ++
Sbjct: 1133 DSDSDGDRKHRKRKDRKRHRKHGHSDSDEAKRHKRRSKRRSSDSSDDTDSDEYDSGSEEE 1192
Query: 169 NT----SHYTQH----SSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHS-QHSTI 321
N SH +H S SDS + + +R D SS+ + RH + S S
Sbjct: 1193 NRRKKRSHRRKHRRHSSRSDSDASDYSSDDEERRSSKKDHSSSRSHRHHHHRSSGDDSGS 1252
Query: 322 DSNVNRQVREGSSQRIVSSDQVASTNQH 405
+S + R R D + +N H
Sbjct: 1253 ESEERGRSRHKKHHRSSDEDATSDSNNH 1280
>06_03_0433 - 20718726-20719895
Length = 389
Score = 32.3 bits (70), Expect = 0.24
Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSH 180
N+D SN++ S + S ++ + ++ T S TL +T S
Sbjct: 171 NED-QSNVKSDGSNEEEAEKKEAVDSQNASESLSDDAKGGTDDEHSSGTLPDETGNLPSG 229
Query: 181 YTQHSSSDS-HVNRQLRGESTQRVLSSDQSSTTNQRHVS----EKHSQHSTIDSNVNRQV 345
++S SD+ E+ S+ + +K S + DSN +
Sbjct: 230 QNENSQSDATSTTSDASSEAVHIETGSENEDAAKSSGTASGDDDKGSANEASDSNETKS- 288
Query: 346 REGSSQRIVSSDQVASTNQHHTSENKAQRNINSTT 450
EG+ VS+DQ A+T ++ E A N ++
Sbjct: 289 DEGNVAAEVSNDQAANTEAGNSQEASAAEAANGSS 323
Score = 28.7 bits (61), Expect = 2.9
Identities = 38/183 (20%), Positives = 74/183 (40%), Gaps = 15/183 (8%)
Frame = +1
Query: 13 DSNIRHLTSERTVTSS-DHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQ 189
+ NI E+ T S D I ++T + K E H G+T +S + T+++++
Sbjct: 60 EENIGETVFEKDNTDSHDDDI---RNTDRSK-AGEGHGSSADGNTEANSNDEDGTTNHSE 115
Query: 190 HSSSDSHVN---RQLRGE---------STQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNV 333
SD+ N + +GE + VL + T H H ST +
Sbjct: 116 GEKSDAESNSSDAESKGEDHSTGDDMPQSNTVLEESSAETNRMPHEEVAHGDESTNEDQS 175
Query: 334 NRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQ--NVTSAQHLS 507
N + + + + V S N + + A+ + +SG+ ++ N+ S Q+ +
Sbjct: 176 NVKSDGSNEEEAEKKEAVDSQNASESLSDDAKGGTDDEH--SSGTLPDETGNLPSGQNEN 233
Query: 508 SRN 516
S++
Sbjct: 234 SQS 236
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 32.3 bits (70), Expect = 0.24
Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Frame = +1
Query: 55 SSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGE 234
SS TS + + +S T +IGS LS D + SSS S LRG
Sbjct: 364 SSMSNATSQTTAKSTRGLSPRRTSTSIGSGALSRNIDLPENDKRPASSSAS-----LRGN 418
Query: 235 STQRVLSSDQ-SSTTNQRHVSEKHSQ---HSTID---SNVNRQVREGSSQRIVSSDQVAS 393
S +R L+SD ++ +EK S+ ST S R +G S+D
Sbjct: 419 SPRRRLASDSVNAVVKNIDFAEKDSRAAISSTSSRGFSPRRRLASDGLDAISRSTDFSDK 478
Query: 394 TNQHHTSENKAQRNINSTTYIT 459
++ TS + AQR I+ +T
Sbjct: 479 DSRPSTSSSSAQRGISPLRRLT 500
>04_04_1488 -
33922253-33922361,33922459-33922649,33922752-33924130,
33924205-33924340,33924427-33924502,33924806-33924925,
33925005-33925082,33925605-33925695,33925805-33925889,
33925977-33926132,33926317-33926373,33926454-33926552,
33926702-33926814,33926924-33927014
Length = 926
Score = 31.1 bits (67), Expect = 0.55
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Frame = +1
Query: 31 LTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLS-----SKTDQNTSHYTQHS 195
LT + ++ S D H Q+ ++ S I S + S S+ +NT YT S
Sbjct: 450 LTKQESLPSDDAQHQFHMANMQNGDLEGSEVQPVIDSISESKLNATSRDPRNTDSYTSRS 509
Query: 196 SSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVS 375
+S+ + + RG+ T+R T +++ S+ S S I N+QV G ++V
Sbjct: 510 TSEQNSKGEPRGK-TRRSKKGLPHKTVSEK--SDLSSAPSWICD--NQQV--GLESKLVG 562
Query: 376 SD-QVASTNQHHTSENKAQRNINSTTYITSGSRVEQ 480
D QV N +S Q N + G +VEQ
Sbjct: 563 CDEQVNCGNIEDSSGALTQGNFVGQPH---GHQVEQ 595
>08_02_0371 + 16365528-16365728,16366471-16366812
Length = 180
Score = 30.7 bits (66), Expect = 0.73
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +1
Query: 130 TIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGE-STQRVLSSDQSSTTNQRHVSEKHS 306
T+ TLSS +SH T+ S S+ + Q++ + +R S++ S R ++H
Sbjct: 2 TLSGGTLSSGITSGSSHGTRSSGSEGDIQLQVQMDLKRKRRKESNRESAKRSRLRKQQHL 61
Query: 307 QHSTIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQR 432
T S VN Q++ + Q + + V + S+N R
Sbjct: 62 DDLT--SQVN-QLKMENQQLTTTLNMVTQSCAFAESQNSVLR 100
>12_02_1038 -
25596027-25596393,25596492-25596660,25597283-25597349,
25597617-25597794,25599157-25599228,25599311-25599717,
25600035-25600740,25600829-25600998,25601963-25602022,
25602385-25602435
Length = 748
Score = 30.3 bits (65), Expect = 0.96
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +1
Query: 160 TDQNTSHYTQHSSSDSHV--NRQLRGEST----QRVLSSDQSSTTNQRHVSEK---HSQH 312
TD + YTQ+S+ D H+ + G +T Q + + QS ++ K S +
Sbjct: 264 TDGPSGSYTQNSAPDPHLYWAGAVEGCATDYTPQMLPGACQSQLVPNDQINNKLNEPSDY 323
Query: 313 STIDSNVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTT 450
+D NV+ Q G +R + +++ + N+ + A+ + NSTT
Sbjct: 324 MPMDHNVSSQNLRGMRRRCLFNEKSGAANE-GAKNSSARHSTNSTT 368
>05_03_0439 +
14028234-14028287,14029394-14029468,14029562-14029642,
14029778-14029934,14030056-14030060,14030152-14030226,
14030332-14030457,14030604-14030822,14031293-14031406,
14031498-14031533,14031630-14031764
Length = 358
Score = 30.3 bits (65), Expect = 0.96
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 328 NVNRQVREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITS 462
N+ +EG S RI+ D + + N+H + A RN Y T+
Sbjct: 28 NLQLMTKEGGSSRIIQDDIIKAINKHPNAGWTAARNPYFANYTTA 72
>02_01_0297 +
1986422-1986570,1986960-1987065,1987188-1987464,
1987805-1988305,1989010-1990016,1990131-1990781,
1991337-1991633,1991735-1992013,1993070-1993198,
1993291-1993491,1993651-1993793,1993878-1994190,
1994349-1994488,1995320-1995398,1995484-1995753,
1996208-1996425,1996521-1996632
Length = 1623
Score = 30.3 bits (65), Expect = 0.96
Identities = 37/175 (21%), Positives = 65/175 (37%), Gaps = 3/175 (1%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSH 180
N D + + E TVTS Q +Q + SH Q IG + S +
Sbjct: 231 NPDFSNGAGYFNGEPTVTSQ------MQQQKQFPSNQNSHQIQHIGGHSNSGMHSNMLEN 284
Query: 181 YTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSN---VNRQVRE 351
+ + SD HVN + + L TN+ SE + ST ++ V +Q +
Sbjct: 285 SSAYGLSDGHVNGGMGVHGSNMQL-------TNRSAASEAYINISTYGNSPKPVQQQFNQ 337
Query: 352 GSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVEQNVTSAQHLSSRN 516
QRI + ++ + + + + A N+ + + + S H + N
Sbjct: 338 HPPQRIPTPVDISGSGNFYNTGSSALTAANNHSMGATNLPSRSRMNSMLHTNQLN 392
>01_05_0286 -
20403748-20403828,20404493-20404693,20404774-20404955,
20405022-20405187,20405318-20405506,20409155-20409238,
20409482-20409550,20409638-20409700,20410327-20410425,
20410882-20410983,20411237-20411341,20412259-20412372
Length = 484
Score = 30.3 bits (65), Expect = 0.96
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 10 TDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHT 123
TD N++ + S+ + +S+ + S H HK+ E+ T
Sbjct: 182 TDKNVQDIASDSEIKTSEQRVDSTTHATSHKDSPETET 219
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Frame = +1
Query: 151 SSKTDQNTSH-YTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDS 327
S + DQ SH + Q S + R + + V + S RH S K QH +++
Sbjct: 79 SHQRDQERSHQHDQERSVERDQERSHQRDQEGSVERDQERSHQRDRHRSVKRDQHRSVEC 138
Query: 328 NVNRQVREGSSQ---RIVSSD 381
+ R + Q ++V SD
Sbjct: 139 DQQRSRQRDQQQGQEKVVGSD 159
>05_01_0128 +
866817-866859,867789-867874,868142-868231,868337-870214,
870606-870795,870888-871483
Length = 960
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +1
Query: 28 HLTSER---TVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTL 150
H+TSE+ ++ SD S+ H++ + + HQT GST L
Sbjct: 616 HVTSEKARHSICISDLSRASNTHSEHPDGVMSNEDHQTSGSTAL 659
>03_05_0394 +
23758392-23758625,23759097-23759273,23759349-23759453,
23759640-23759681,23759763-23759960,23760037-23760165,
23760248-23760377,23761119-23761179,23761241-23761322,
23761402-23761653
Length = 469
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +1
Query: 79 HQHTQQ---HKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRV 249
+QH +Q H N + T+ + +S+ T QHSS S + Q ++ V
Sbjct: 388 NQHFEQNEPHSNSIYLSSSSTVLAAAISAATAVQFQQQQQHSSLSSGITVQFHSSNSSSV 447
Query: 250 LSSDQSSTTNQRHVSEKHS 306
Q S+++ +S S
Sbjct: 448 SFQQQQSSSSSSTISSSSS 466
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 29.5 bits (63), Expect = 1.7
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Frame = +1
Query: 136 GSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRG--ESTQRVLSSDQSSTTN--------QR 285
G T + S D + S H S+D H+ + + + +S++ +T Q+
Sbjct: 2165 GMTGIESG-DHSCSVVQNHLSADDHIKSVVNQLVAAIKTTQNSNEGNTKELKATVLELQQ 2223
Query: 286 HVSEKHSQHSTIDSNVNRQVREG-SSQRIVSSDQVASTNQHHTSENKAQRNIN 441
+ EKH Q STI + + QV+E SS + +S + + + H E ++ +N
Sbjct: 2224 ELQEKHIQISTISAELASQVKEAESSAKQLSVELENARMEIHNLEKHSEMLLN 2276
>09_06_0059 -
20584196-20584288,20584389-20585055,20585411-20585732,
20585862-20586000,20586261-20586322,20586371-20586434,
20586674-20586826,20586952-20587082,20587175-20587336,
20588060-20588264
Length = 665
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 67 GITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSS 198
G+ QHTQQ N++E H +T T + +N H S
Sbjct: 169 GVLDVQHTQQEDNLTERHEQKT--GVTKAEHVTENVVHKNMECS 210
>08_01_0327 - 2942640-2943456,2944386-2944515,2944679-2944811
Length = 359
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +1
Query: 124 HQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKH 303
HQ + + Q H+ QH H N Q E Q +L DQ T+ + +
Sbjct: 286 HQQLEIELEEEEQRQLGHHHHQHHHEHEHENHQWDEEEAQHLLMWDQEVLTSSNLEAMQS 345
Query: 304 SQHSTI 321
HS +
Sbjct: 346 GAHSLL 351
>03_04_0216 +
18695292-18696139,18696217-18696339,18697027-18697222,
18697361-18697519
Length = 441
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 151 SSKTDQNTSHYTQH--SSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTID 324
S++++Q + Y+ +S+D + RG+ +++ S S+ + V K +T D
Sbjct: 220 STRSEQGSQDYSGKFKASNDGGPSSSRRGDRGEQISGSSDSNDQGEEEV--KVEGRATSD 277
Query: 325 SNVNRQVREGSSQRIV 372
N N++ +QRI+
Sbjct: 278 GNANKRHVPAPAQRII 293
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +1
Query: 196 SSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVS 375
S H+ R + +R SSD T ++ + H QHS+ D + ++ R ++
Sbjct: 366 SDTPHLERS-QSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRDYSHSKHERSSHTEHRRD 424
Query: 376 SDQVASTNQHHTSENK 423
+ +++++H E K
Sbjct: 425 RKESSASDKHRHREIK 440
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 28.7 bits (61), Expect = 2.9
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Frame = +1
Query: 16 SNIRHL-----TSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSH 180
SN+ HL ++ +TS H +H ++ QH +++ GST + + +
Sbjct: 351 SNMTHLPEFIAVEDKIMTSEPHFSKTHPNSGQHDTGDKANQDVGCGSTGIQTAAALPSEG 410
Query: 181 YTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHV----SEKHSQHSTIDSNV--NRQ 342
+ D + G +TQ + +Q + +++ H+ S+K +Q D N+ N
Sbjct: 411 FNGDVQGDKSEIKDPAGNTTQHTETFEQEN-SDKAHLEVGCSDKVNQALYDDGNIIKNNM 469
Query: 343 VREG-SSQRIVSSDQVASTNQHHTSE 417
V G + Q + S + T + SE
Sbjct: 470 VFGGLNKQTALESHGCSMTLHNRNSE 495
>11_02_0123 -
8550193-8550213,8550434-8550682,8550787-8550834,
8550939-8551025,8551104-8551184,8551264-8551368,
8551464-8551556,8551635-8551715,8551794-8551895,
8552144-8552224,8552304-8552405,8552499-8552834,
8552920-8553006,8553275-8553493,8553575-8553769
Length = 628
Score = 28.7 bits (61), Expect = 2.9
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Frame = +1
Query: 115 SHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVS 294
+H H T + + + ++ + ++ DSH NR + QR L S S+ + + S
Sbjct: 425 THEHVTNEGYSFGQDSRNDITNGSVNNFEDSHTNRNAIQNNVQR-LQSVSSTRPKESYSS 483
Query: 295 EK------HSQHSTIDSNVNR-QVREGSSQRIVSSDQVASTNQH------HTSENKAQRN 435
+ ++ S I S+V R + + ++ I+ D+ Q HTS QR
Sbjct: 484 QDLPYQNLTTKQSIIQSSVKRPRTSQSCAESILPHDKTKQVPQRKEAVLKHTSSKSGQRE 543
Query: 436 --------INSTTYITSGSRVEQNVTSAQHLSSRN 516
IN + G+ V T A H+ RN
Sbjct: 544 VYLFSLNAINKDKLVAKGNLV---TTDATHVVGRN 575
>02_05_0583 +
30128795-30129158,30129342-30129505,30129602-30129665,
30130082-30130215,30130369-30130452,30130580-30130654,
30130734-30130805,30130892-30130965,30131217-30131269,
30131388-30131497,30131824-30131892,30131975-30132049,
30132449-30132508,30132555-30132647,30132718-30132797,
30132877-30132976,30133153-30133590
Length = 702
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/78 (17%), Positives = 34/78 (43%)
Frame = +1
Query: 196 SSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVS 375
SSD + ++ + + V ++++ ++ +K H T+ ++ + R G +
Sbjct: 585 SSDDPQKQPIQSKKHKDVKTTNEETSILDGVTKDKRQTHETLKNHKKGKKRNGPESTKIK 644
Query: 376 SDQVASTNQHHTSENKAQ 429
DQ + N+ + K Q
Sbjct: 645 GDQKETHNEEEPTSEKKQ 662
>10_08_0573 +
18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 28.3 bits (60), Expect = 3.9
Identities = 21/108 (19%), Positives = 46/108 (42%)
Frame = +1
Query: 58 SDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSSSDSHVNRQLRGES 237
+D ++ H + ++S + I ++ L S D+ SHY + H+ ++LRG+
Sbjct: 158 NDKRVSRHFDVRIWAHVSPDFNIKRISASILESIYDK--SHYDNLDTLQKHIQKRLRGKR 215
Query: 238 TQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSD 381
VL + + ++ ++ S V R G+ +++ D
Sbjct: 216 FLLVLDDYWTENWHDWEEVKRPLLKASAGSKVIVTTRSGAVAKLLGMD 263
>08_01_0874 +
8575718-8576422,8576603-8576662,8576799-8576945,
8577390-8577527
Length = 349
Score = 28.3 bits (60), Expect = 3.9
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Frame = +1
Query: 151 SSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSN 330
SS + NTS SSS ++RQL + V + + TN + + +N
Sbjct: 126 SSPSSSNTSSAGSLSSSSRSISRQLH----RSVPKTRKDGGTNGSNARMRSDSGGNSGAN 181
Query: 331 VNRQV-REGSSQRIVSSDQV--ASTNQHHTSENKAQRNINSTTYITSG-SRVEQNVTSAQ 498
V+R+ +G + R VS + S NQ + +ST Y G +++ +S +
Sbjct: 182 VHRRADLQGPTGRFVSQSLLRHRSRNQEEPVSHLENSLNDSTEYWRFGVDESDEDASSDR 241
Query: 499 HLSSR 513
H R
Sbjct: 242 HRGMR 246
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +1
Query: 4 QDTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHY 183
+D DS+ H TSS + + +++N ++ HQT S T+ ++N+SH
Sbjct: 1459 KDCDSDHAHTYG----TSSSYNVNKMDSVSRNRNPTQESMHQTTESGTM----EKNSSHL 1510
Query: 184 TQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQ 282
+ S + R V+ +D +TTNQ
Sbjct: 1511 PAGTKSCT------RTYLNNHVVQADTITTTNQ 1537
>03_06_0448 - 34005581-34005655,34005735-34005830,34006669-34007616,
34007684-34007851,34007908-34008099,34008164-34008346,
34008414-34008590,34008667-34012074
Length = 1748
Score = 28.3 bits (60), Expect = 3.9
Identities = 31/144 (21%), Positives = 61/144 (42%), Gaps = 4/144 (2%)
Frame = +1
Query: 1 NQDTDSNIRHLTSERTVTSSDHGITSHQHTQQ-HKNISESHTHQTIGSTTLSSKTDQNTS 177
+Q T++ R+ T S + G+ H + H+ + T G T SSK +QN
Sbjct: 1385 DQGTENENRNQNLVNT-DSFECGVEPHGTLKTTHETLPTVQVVSTSGDT-FSSKNEQNDV 1442
Query: 178 HYTQHSSSDSHV--NRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVRE 351
+ + SD+ V + Q + ++R + + R ++ + + I+ ++ R+ E
Sbjct: 1443 PWEDQNKSDAEVSESNQTAPKESERTIPPEH----EDREEEKEENMENKIEISIGRENDE 1498
Query: 352 GSSQRIVSSD-QVASTNQHHTSEN 420
S Q + + VA + EN
Sbjct: 1499 VSEQETSTEECIVAPSGMDDRDEN 1522
>02_05_0611 +
30344637-30344652,30344743-30344883,30345258-30345572,
30345907-30346053,30346446-30346543,30346719-30346805,
30346870-30347080,30347589-30347674
Length = 366
Score = 28.3 bits (60), Expect = 3.9
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +1
Query: 7 DTDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESH--THQTIGSTTLSSKTDQNTSH 180
D+D + LTS++ T + S ++ ++ N E H I + T K D+ +S
Sbjct: 79 DSDDMLELLTSKKDETKLKNKKKSKKNLKEGSNPVEEHQSLSDRINAGTPKLKKDRRSSD 138
Query: 181 YTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVS--EKHSQHSTIDS 327
++ H N Q T++ S +SS ++ S K +H +D+
Sbjct: 139 EPNNADEVLHGN-QDEETPTEKTKKSGKSSKKDKHESSRENKLDRHGEVDT 188
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 232 ESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQR 366
EST R S+ +S+ V + S H+ S +NR R+ S QR
Sbjct: 513 ESTDRTWSASRSTNNGDEVVEQGSSSHAGARSPLNRS-RQSSKQR 556
>11_06_0294 +
22022630-22024006,22024109-22024234,22024319-22024423,
22024525-22024659,22024798-22024847,22026487-22026545,
22026819-22026928,22027941-22028174,22028278-22028377,
22028699-22028829,22029834-22029914,22029970-22030128
Length = 888
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 16 SNIRHLTSERTVTSS--DHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNT 174
+N +++ + T+ SS DH SH+ HKN +ES +G++ L + + NT
Sbjct: 682 NNSKNILYKTTLFSSCPDHRCLSHELFGMHKNATESTYFLNVGASELRN-IEMNT 735
>05_01_0006 -
44159-44206,44805-44850,45730-45818,46377-46394,
46490-46609,46702-46772,47038-47086,47567-47658,
47769-47811,47928-48049,48143-48426,48961-49148,
49220-49336,49516-49557,49991-50101,50530-50688,
50710-50769,50850-50927,51010-51103,51182-51483,
51659-51721,51808-51936
Length = 774
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +1
Query: 145 TLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTID 324
T SS + T+ QH+ H ++ L + L +DQS+ ++ E+ + S +
Sbjct: 91 TTSSSLNSRTALADQHNGLFHHTDQMLHDAIKLKYLDTDQSNGMPRKLSGEQSAPESRVP 150
Query: 325 SNVN 336
S+++
Sbjct: 151 SHLS 154
>03_01_0050 +
430744-431337,432131-432249,432539-433084,433177-433483,
433605-433773,433861-433960,435805-436103,436796-436869,
437007-437442,437622-437650
Length = 890
Score = 27.9 bits (59), Expect = 5.1
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 9/139 (6%)
Frame = +1
Query: 52 TSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSH--YTQHSSSDSHVNRQ- 222
T D + + H Q++ +E THQ++ + ++ + TS+ Q ++R
Sbjct: 262 TIVDLHLHENDHRQENATHNEIQTHQSMENESVDIQRSITTSNDDVVQSDFGQEQLHRYE 321
Query: 223 ------LRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGSSQRIVSSDQ 384
E++++ SS S +NQ+ Q + + S +G + V + Q
Sbjct: 322 DYPDSGSSEEASEQSDSSSPSDNSNQQEEETYEQQTNLLWSRETSSSEDGDHEWNVMNSQ 381
Query: 385 VASTNQHHTSENKAQRNIN 441
A + RNIN
Sbjct: 382 EAEAQWRSGPSFSSNRNIN 400
>10_08_1045 -
22535516-22535593,22535681-22535756,22535843-22535946,
22536048-22536176,22536539-22536700,22537029-22537259,
22537345-22537428,22537515-22537583,22537671-22537739,
22537827-22537889,22537913-22538052,22538527-22539097
Length = 591
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 10 TDSNIRHLTSERTVTSSDHGITSHQHTQQHKNISESHT 123
TD N++ + S+ + +S+ + S H HK+ E+ +
Sbjct: 302 TDKNVQDIPSDSDIKTSEKRVDSTTHATSHKDRPETES 339
>07_03_1769 +
29377784-29377878,29377993-29378180,29378340-29378472,
29378580-29378715,29378996-29379072,29379162-29380830,
29380935-29381018,29381120-29381224,29381302-29381358
Length = 847
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/92 (22%), Positives = 39/92 (42%)
Frame = +1
Query: 145 TLSSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTID 324
T S Q + + SSS+ +++ ES+ +V +STT VSE+ +
Sbjct: 231 TNGSPMPQMHNFQNETSSSELNISSNCSPESSIKVTQDIGASTTGTDSVSEERNLELERT 290
Query: 325 SNVNRQVREGSSQRIVSSDQVASTNQHHTSEN 420
S+ + + + DQ+A H++ N
Sbjct: 291 SSFEAWLSPNAHN--IQHDQIAEEMPHYSCNN 320
>06_01_0405 +
2897802-2898126,2898206-2898430,2898541-2898683,
2898783-2899091
Length = 333
Score = 27.5 bits (58), Expect = 6.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 116 LSEIFLCCCVCWCDVIP 66
+ + + CC+CWC V P
Sbjct: 16 VGSVLVVCCLCWCAVQP 32
>03_06_0722 - 35751490-35754357
Length = 955
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/105 (21%), Positives = 40/105 (38%)
Frame = +1
Query: 163 DQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQ 342
D+ S S R E + LS+D+S + + ++S + T D +
Sbjct: 585 DRRRRKIRSESKRLSSEGRSANNEHIEGELSTDESDSESSAYLSSRDELLKTADLVFSDA 644
Query: 343 VREGSSQRIVSSDQVASTNQHHTSENKAQRNINSTTYITSGSRVE 477
E SS RIV Q+ + A +++ + T R+E
Sbjct: 645 AEEYSSLRIVKDKFEGWKTQYPLAYRDAHVALSAPSVFTPYVRLE 689
>02_05_1090 - 34027737-34028582
Length = 281
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = +1
Query: 19 NIRHLTSERTVTSSDHGITSHQHTQQHKNISESHTHQTIGSTTLSSKTDQNTSHYTQHSS 198
N+R+LT + V +D+G++ H Q ++++ IG +S K Q + + + S
Sbjct: 210 NLRNLTLRKCVCVTDNGVSELVHAQNLESLT------IIGCHRISLKAVQGAAR-SVYYS 262
Query: 199 SDSHVNRQLRGESTQR 246
++S + L+G R
Sbjct: 263 AESEKHESLKGMKMTR 278
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 27.1 bits (57), Expect = 8.9
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Frame = +1
Query: 151 SSKTDQNTSHYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHS---QHSTI 321
S+K ++ S HS S S + R S R S +S + R S HS + S
Sbjct: 186 SAKRSRSRSRGRSHSRSISRSRSRSRSISRSRSRSYSRSRSPRSRSASRSHSPVKERSRS 245
Query: 322 DSNVNRQVREGSSQR 366
S V+E S R
Sbjct: 246 ASQSRSPVKERSPSR 260
>04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744
Length = 381
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -3
Query: 178 ERYFDQFYLIK*WSL*FDGCDFLKYF 101
E D FYL W L F GCDF Y+
Sbjct: 144 EHSLDAFYLTL-WGLRFSGCDFDVYW 168
>03_04_0174 - 18044516-18046327
Length = 603
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 178 HYTQHSSSDSHVNRQLRGESTQRVLSSDQSSTTNQRHVSEKHSQHSTIDSNVN 336
H+ QH++S S ++ + + R +S SS H HS HS ++N N
Sbjct: 14 HHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHS-HSHYNNNSN 65
>01_01_0051 + 389051-389623
Length = 190
Score = 27.1 bits (57), Expect = 8.9
Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = +1
Query: 73 TSHQHTQQHKNISESHTHQTIGSTTLSSKTD-QNTSHYTQHSSSDSHVNRQLRGESTQRV 249
T H TQ E + + SS D Q +SH T SSS S+
Sbjct: 60 TLHSQTQTPAGEDEDNNATPPEAPAASSLKDRQRSSHGTDTSSSSE--------SSSSSS 111
Query: 250 LSSDQSSTTNQRHVSEKHSQHSTIDSNVNRQVREGS 357
SS +SS+++ SE S S D RQ R S
Sbjct: 112 SSSSESSSSSSSSSSESSSSSSDDDLARRRQQRNPS 147
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.300 0.110 0.285
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,683,827
Number of Sequences: 37544
Number of extensions: 243442
Number of successful extensions: 457
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
- SilkBase 1999-2023 -