Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F08f
         (485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.9  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 289 KRL*FIIYKCKHNLMTTATVVELKLNKH 372
           K L   I K    ++   T+VE KLNKH
Sbjct: 264 KPLNLTIKKMPIAIVAPFTIVEPKLNKH 291


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 289 KRL*FIIYKCKHNLMTTATVVELKLNKH 372
           K L   I K    ++   T+VE KLNKH
Sbjct: 156 KPLNLTIKKMPIAIVAPFTIVEPKLNKH 183


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -1

Query: 440 GICCSECPLYFICINENM*ISFKCLFS 360
           G CC+ C      +  N  +  KC+F+
Sbjct: 726 GECCAICVNATSLVESNRNVPQKCIFN 752


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 204 HPVSIIKGKLIKMF*WFISQKRS 136
           HP  IIK +L+    W  S  +S
Sbjct: 300 HPYQIIKNQLVYDVPWIASFTKS 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,079
Number of Sequences: 336
Number of extensions: 1912
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)