Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F08f
         (485 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ316029-1|ABC48776.1|  534|Drosophila melanogaster always early...    32   0.48 
DQ316030-1|ABC48777.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316027-1|ABC48774.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316026-1|ABC48773.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316025-1|ABC48772.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316024-1|ABC48771.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316023-1|ABC48770.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316022-1|ABC48769.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316021-1|ABC48768.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316020-1|ABC48767.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316019-1|ABC48766.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316018-1|ABC48765.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316017-1|ABC48764.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316016-1|ABC48763.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316015-1|ABC48762.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316014-1|ABC48761.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316013-1|ABC48760.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316012-1|ABC48759.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316011-1|ABC48758.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316009-1|ABC48756.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316008-1|ABC48755.1|  534|Drosophila melanogaster always early...    29   2.6  
DQ316007-1|ABC48754.1|  532|Drosophila melanogaster always early...    29   2.6  
BT011102-1|AAR82768.1|  611|Drosophila melanogaster RE01333p pro...    29   2.6  
AE014296-532|AAF47702.3|  568|Drosophila melanogaster CG2075-PA ...    29   2.6  
DQ316010-1|ABC48757.1|  534|Drosophila melanogaster always early...    29   4.5  
AJ277307-1|CAB86720.1|  534|Drosophila melanogaster always early...    29   4.5  

>DQ316029-1|ABC48776.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   STL+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNEKLGRENSSTLETIIADLVTHMVDNIQPSLGRK 479


>DQ316030-1|ABC48777.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316027-1|ABC48774.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316026-1|ABC48773.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316025-1|ABC48772.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316024-1|ABC48771.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316023-1|ABC48770.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316022-1|ABC48769.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316021-1|ABC48768.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316020-1|ABC48767.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316019-1|ABC48766.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316018-1|ABC48765.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316017-1|ABC48764.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316016-1|ABC48763.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316015-1|ABC48762.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316014-1|ABC48761.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316013-1|ABC48760.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRESSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316012-1|ABC48759.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316011-1|ABC48758.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316009-1|ABC48756.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316008-1|ABC48755.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 479


>DQ316007-1|ABC48754.1|  532|Drosophila melanogaster always early
           protein.
          Length = 532

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 425 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 477


>BT011102-1|AAR82768.1|  611|Drosophila melanogaster RE01333p
           protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 493 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 545


>AE014296-532|AAF47702.3|  568|Drosophila melanogaster CG2075-PA
           protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 461 IESDRTQEFVRNLHTILYLNGKLGRENSSNLETIIADLVTHMVDNIQPSLGRK 513


>DQ316010-1|ABC48757.1|  534|Drosophila melanogaster always early
           protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSHLETIIADLVTHMVDNIQPSLGRK 479


>AJ277307-1|CAB86720.1|  534|Drosophila melanogaster always early
           protein protein.
          Length = 534

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -3

Query: 153 ISQKRSVNNVRNFHVVLIIFVKMGK---STLDLISLNVCLHYMKNKSPILKKK 4
           I   R+   VRN H +L +  K+G+   S L+ I  ++  H + N  P L +K
Sbjct: 427 IESDRTQEFVRNLHTILYLNGKLGRENSSHLETIIADLVTHMVDNIQPSLGRK 479


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,311,841
Number of Sequences: 53049
Number of extensions: 272021
Number of successful extensions: 960
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)