Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F08f
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.0  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 279 LIKKTTMIYYLQM*T*SNDHSHSCRIKTKQTFKTNL 386
           +IK+T +  YLQ+     D  H C +  K   +T L
Sbjct: 320 VIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 355


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 279 LIKKTTMIYYLQM*T*SNDHSHSCRIKTKQTFKTNL 386
           +IK+T +  YLQ+     D  H C +  K   +T L
Sbjct: 235 VIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 270


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 279 LIKKTTMIYYLQM*T*SNDHSHSCRIKTKQTFKTNL 386
           +IK+T +  YLQ+     D  H C +  K   +T L
Sbjct: 554 VIKRTVVSSYLQLQDLLGDFEHPCVMDCKVGVRTYL 589


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -3

Query: 87  MGK-STLDLISLNVCLHYMKNKSPI 16
           +GK ST++    N C HY+  KS +
Sbjct: 560 LGKLSTIEDADKNQCRHYLDAKSSV 584


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 201 PVSIIKGKLIKMF*WFISQKRSVN 130
           PV++ KGK   M  WF+S++R ++
Sbjct: 580 PVTM-KGKSEPMNVWFLSRERELS 602


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 201 PVSIIKGKLIKMF*WFISQKRSVN 130
           PV++ KGK   M  WF+S++R ++
Sbjct: 580 PVTM-KGKSEPMNVWFLSRERELS 602


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,941
Number of Sequences: 438
Number of extensions: 1705
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)