Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F07f
         (323 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   3.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   7.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 7    CSLQYSRCSGNMVPRNC 57
            CS  Y   +G++VP+NC
Sbjct: 1218 CSSFYVCVNGHLVPQNC 1234


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 76  EVPLVSSKLPSCTDY*P 126
           E+P V    P C DY P
Sbjct: 625 EMPPVPKDFPQCGDYVP 641


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 7.5
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 91 IPRVLLLVWFDNSFSEPCYRSID 23
          I  VL  VWF +     C RSID
Sbjct: 6  ITDVLKHVWFLSKLFLLCPRSID 28


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 19.4 bits (38), Expect = 9.9
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = -1

Query: 260 GLVAHTSCNLHSVA*ECLISQSL 192
           G ++   C+++S+   CL+++ L
Sbjct: 370 GFISDFDCDINSIQYFCLMARCL 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,428
Number of Sequences: 336
Number of extensions: 1183
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6155018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)