Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F07f
(323 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79600-3|CAB01876.1| 260|Caenorhabditis elegans Hypothetical pr... 100 2e-22
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 27 2.3
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 27 3.1
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 27 3.1
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 27 3.1
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 27 3.1
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 27 3.1
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 27 3.1
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 27 4.1
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 26 5.4
Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical p... 25 9.5
Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical p... 25 9.5
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 25 9.5
>Z79600-3|CAB01876.1| 260|Caenorhabditis elegans Hypothetical
protein F59C6.5 protein.
Length = 260
Score = 100 bits (240), Expect = 2e-22
Identities = 43/94 (45%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Frame = +2
Query: 14 YNTVDAPVTWFRETVVEP--NQKKYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDR 187
+ DAP TWFRET+V+P N+ + P+YH+ RVP ID+C +D C +EAN Q++ D+
Sbjct: 41 HKAFDAPATWFRETIVQPLNNKNRLPYYHRQLTRVPEIDECGVNDKACFYEANEQYRLDK 100
Query: 188 AVDSEILSILRQRYEDCMMYEQPDHATKCRSLWD 289
VD IL LRQR + CM+Y PDH+ + + D
Sbjct: 101 MVDGFILQTLRQRVDRCMLYNNPDHSPCAKVIED 134
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 122 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYE 232
D+ YDD+ E NA+F + DS+ I+ R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 122 DQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYE 232
D+ YDD+ E NA+F + DS+ I+ R E
Sbjct: 119 DEAYDDEEDFTVETNAEFNENSLDDSDEYPIVPNRQE 155
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.1 bits (57), Expect = 3.1
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 158 EANAQFKRDRAVDSEILSILRQRYEDCMMYEQ----PDHATKCRSLWDKY 295
+A A +R R+ S S + DC + E+ D + KCR W+KY
Sbjct: 417 KAKADSERGRSSTSSSSSSFDKLIWDCPLIEKYPFGADASDKCREKWNKY 466
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 47 RETVVEPNQKKYPWYHQNYRRVPTIDQCYDDD 142
R+ + + NQKK H+ +R PTI D+D
Sbjct: 4178 RKILADQNQKKQLIMHEEKKRTPTILTIGDED 4209
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/49 (22%), Positives = 25/49 (51%)
Frame = +2
Query: 62 EPNQKKYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDSEIL 208
+P Q+ Y + + P + + ++ D+EA + + R +DSE++
Sbjct: 1026 QPGQRPVFPYRDDQAQEPVPESAPNRCLIADYEAQIEAELQRMIDSEMI 1074
>Z74042-16|CAA98527.3| 512|Caenorhabditis elegans Hypothetical
protein T11F9.2b protein.
Length = 512
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 107 DGSFDD-TKGTSSGLVRQQFLGTMLPEHR 24
D S+D+ SSG+ FLGT++PE R
Sbjct: 441 DDSYDEYIFAISSGMYMYIFLGTLIPEIR 469
>Z74042-15|CAD54157.1| 505|Caenorhabditis elegans Hypothetical
protein T11F9.2a protein.
Length = 505
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 107 DGSFDD-TKGTSSGLVRQQFLGTMLPEHR 24
D S+D+ SSG+ FLGT++PE R
Sbjct: 434 DDSYDEYIFAISSGMYMYIFLGTLIPEIR 462
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 64 FDNSFSEPCYRSIDCIVE 11
F+N+ +PCY + DCIVE
Sbjct: 464 FENT-QKPCYSNPDCIVE 480
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,822,504
Number of Sequences: 27780
Number of extensions: 120649
Number of successful extensions: 353
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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