Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F07f
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.23 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   0.70 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   0.70 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   3.7  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   4.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   4.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.23
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 92  HQNYRRVPTIDQCYDDDVVCDFEANAQF 175
           H +YR+ PT+ + Y   V   + + AQF
Sbjct: 363 HLHYRQPPTLSESYSSYVNSMYASGAQF 390


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 152 DFEANAQFKRDRAVDSEILSILRQRYEDCMMY 247
           D E     K+D AV+ E   ++RQ Y+D + Y
Sbjct: 18  DSETWEAIKKDAAVNMEGQFLVRQIYDDEITY 49


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 152 DFEANAQFKRDRAVDSEILSILRQRYEDCMMY 247
           D E     K+D AV+ E   ++RQ Y+D + Y
Sbjct: 18  DSETWEAIKKDAAVNMEGQFLVRQIYDDEITY 49


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 0.92
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 297 LYLSQRDLHLVAWSGCSYIM 238
           L+L  +D+H++ W G  ++M
Sbjct: 51  LHLLYQDVHVMIWIGFGFLM 70


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 94  MIPRVLLLVWFDNS 53
           +IPR+L L W+ ++
Sbjct: 804 VIPRILYLTWYSSN 817


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 314 KLPQQTCTCPKETCI*LHGLVAHTSCNLHSV 222
           K P  +C CP    +   GL+     ++HS+
Sbjct: 56  KSPLLSCACPDGLKLLSDGLMCVEKDSIHSI 86


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 85 RVLLLVWFDN 56
          +VLLLVW+D+
Sbjct: 66 KVLLLVWWDH 75


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 256 RPCN*MQVSLGQVQVC 303
           RPCN + VSL    +C
Sbjct: 74  RPCNYLLVSLAVSDLC 89


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 248  EQPDHATKCRSL 283
            EQP H T C +L
Sbjct: 1082 EQPPHDTTCTTL 1093


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,532
Number of Sequences: 438
Number of extensions: 1526
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)