Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS301F05f
(384 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1... 176 1e-43
UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 102 3e-21
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu... 92 4e-18
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 85 6e-16
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ... 68 7e-11
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot... 67 9e-11
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein... 57 1e-07
UniRef50_Q7RE07 Cluster: CCAAT-box DNA binding protein subunit B... 36 0.26
UniRef50_Q9Z5W0 Cluster: Ortho-halobenzoate 1,2-dioxygenase alph... 35 0.46
UniRef50_Q8IAU8 Cluster: Putative uncharacterized protein MAL8P1... 33 2.5
UniRef50_Q91F68 Cluster: 458R; n=1; Invertebrate iridescent viru... 32 3.3
UniRef50_Q81JK0 Cluster: Membrane protein, putative; n=5; Bacill... 32 3.3
UniRef50_A5KJ50 Cluster: Sensor protein; n=1; Ruminococcus torqu... 32 3.3
UniRef50_Q54R27 Cluster: Putative uncharacterized protein; n=1; ... 32 4.3
UniRef50_Q1UZN8 Cluster: DNA processing chain A; n=1; Candidatus... 31 5.7
UniRef50_Q7RPU6 Cluster: Putative uncharacterized protein PY0135... 31 5.7
UniRef50_Q9KS92 Cluster: GGDEF family protein; n=16; Vibrio chol... 31 7.5
UniRef50_Q9EU62 Cluster: VapG protein; n=1; Rhodococcus equi|Rep... 31 7.5
UniRef50_A5ZET2 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_A7EW00 Cluster: Putative uncharacterized protein; n=1; ... 31 7.5
UniRef50_Q4FM63 Cluster: Outer membrane protein omp1; n=2; Candi... 31 9.9
UniRef50_Q9XZX4 Cluster: Putative uncharacterized protein L2743.... 31 9.9
UniRef50_Q7RJ40 Cluster: Putative uncharacterized protein PY0342... 31 9.9
UniRef50_Q6FJX3 Cluster: Candida glabrata strain CBS138 chromoso... 31 9.9
UniRef50_Q8TQ35 Cluster: Cell surface protein; n=1; Methanosarci... 31 9.9
>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 176 bits (428), Expect = 1e-43
Identities = 79/111 (71%), Positives = 93/111 (83%)
Frame = +3
Query: 3 KSAVVVLCLFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITN 182
K A+V+LCLF ASLYA + N+IL E LYN V++ADYDSAVE+SK +Y + K E+ITN
Sbjct: 2 KPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITN 61
Query: 183 VVNNLIRNNKMNCMEYAYQLWMQGSEDIVRDCFPVEFTLILAENYVKLMYR 335
VVN LIRNNKMNCMEYAYQLW+QGS+DIVRDCFPVEF LI AEN +KLMY+
Sbjct: 62 VVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFPVEFRLIFAENAIKLMYK 112
>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
Length = 264
Score = 102 bits (244), Expect = 3e-21
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Frame = +3
Query: 12 VVVLCLFAAS-----LYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELI 176
V +C+ AAS L AD + N+ L + LYN ++ DYDSAV +S + +G ++
Sbjct: 6 VFAMCVPAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIV 65
Query: 177 TNVVNNLIRNNKMNCMEYAYQLWMQGSEDIVRDCFPVEFTLILAENYVKLMYR 335
NVVNNLI + + N MEY Y+LW+ +DIV+ FP+ F LI+A NYVKL+YR
Sbjct: 66 QNVVNNLIIDKRRNTMEYCYKLWVGNGQDIVKKYFPLSFRLIMAGNYVKLIYR 118
>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
sexta|Rep: Microvitellogenin precursor - Manduca sexta
(Tobacco hawkmoth) (Tobacco hornworm)
Length = 249
Score = 91.9 bits (218), Expect = 4e-18
Identities = 40/89 (44%), Positives = 62/89 (69%)
Frame = +3
Query: 63 AFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYAYQL 242
AF ++ +YN+V+I D D AV +SK + KG++IT VN LIR+++ N MEYAYQL
Sbjct: 15 AFAAPTSDDIYNNVVIGDIDGAVAKSKELQKQGKGDIITEAVNRLIRDSQRNTMEYAYQL 74
Query: 243 WMQGSEDIVRDCFPVEFTLILAENYVKLM 329
W + DIV++ FP++F ++L E+ +KL+
Sbjct: 75 WSLEARDIVKERFPIQFRMMLGEHSIKLI 103
>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 84.6 bits (200), Expect = 6e-16
Identities = 39/104 (37%), Positives = 62/104 (59%)
Frame = +3
Query: 18 VLCLFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNL 197
VL + A + A +++LAE LY V+I +Y++A+ + + KGE+I V L
Sbjct: 9 VLAVCALASNATLAPRTDDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRL 68
Query: 198 IRNNKMNCMEYAYQLWMQGSEDIVRDCFPVEFTLILAENYVKLM 329
I N K N M++AYQLW + ++IV+ FP++F +I E VKL+
Sbjct: 69 IENGKRNTMDFAYQLWTKDGKEIVKSYFPIQFRVIFTEQTVKLI 112
>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
Bombyx mori (Silk moth)
Length = 267
Score = 67.7 bits (158), Expect = 7e-11
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Frame = +3
Query: 9 AVVVLCLFAASLYAD-EGTAFNEILAEHLYNDV-----IIADYDSAVERSKLIYTDNKGE 170
AV+ LCL AAS +G I A Y D+ I +Y++A + + + G
Sbjct: 5 AVLALCLVAASATPSIDGDDRYPIHAPSGYEDIVTNAIITRNYEAAASMTVQLKRRSSGR 64
Query: 171 LITNVVNNLIRNNKMNCMEYAYQLW--MQGSEDIVRDCFPVEFTLILAENYVKLM 329
IT +VN LIR NK N + AY+LW M S++IV++ FPV F I +EN VK++
Sbjct: 65 YITIIVNRLIRENKRNICDLAYKLWDYMDESQEIVKEYFPVIFRQIFSENSVKII 119
>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
protein; n=1; Bombyx mori|Rep: Putative paralytic
peptide-binding protein - Bombyx mori (Silk moth)
Length = 436
Score = 67.3 bits (157), Expect = 9e-11
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 84 EHLYNDVIIADYDSAVERSKLIYTDNKGE-LITNVVNNLIRNNKMNCMEYAYQLWMQGSE 260
+HLYN V DY +AV+ + + DN+G + +VV+ L+ N M +AY+LW +G +
Sbjct: 208 DHLYNLVTGGDYINAVKTVRSL-DDNQGSGVCRDVVSRLVSQGIKNAMSFAYKLWHEGHK 266
Query: 261 DIVRDCFPVEFTLILAENYVKLM 329
DIV D FP EF LIL + +KL+
Sbjct: 267 DIVEDYFPSEFQLILDQKRIKLI 289
>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
n=1; Mythimna separata|Rep: Growth blocking peptide
binding protein - Pseudaletia separata (Oriental
armyworm) (Mythimna separata)
Length = 430
Score = 57.2 bits (132), Expect = 1e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +3
Query: 45 YADEGTAF--NEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMN 218
Y + AF N E +YN VI DYD+AV ++ + E +V L+
Sbjct: 184 YYNSHVAFLDNHNFEEEVYNSVINGDYDAAVNMAQSYGVASNSEFTNRIVTRLMTAFPRK 243
Query: 219 CMEYAYQLWMQGSEDIVRDCFPVEFTLILAENYVKLM 329
M +AY+LW G+++IVR+ FP F I E+ V ++
Sbjct: 244 LMSFAYKLWHGGAKEIVRNHFPKAFQHIFNEDAVTIV 280
>UniRef50_Q7RE07 Cluster: CCAAT-box DNA binding protein subunit B;
n=5; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA binding
protein subunit B - Plasmodium yoelii yoelii
Length = 850
Score = 35.9 bits (79), Expect = 0.26
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 102 VIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMN 218
V + Y+ VE S +I T+NK + TN +N NNK+N
Sbjct: 72 VKLVTYEDNVETSNIITTNNKNTIFTNSINEYNINNKLN 110
>UniRef50_Q9Z5W0 Cluster: Ortho-halobenzoate 1,2-dioxygenase
alpha-ISP protein OhbB; n=4; Proteobacteria|Rep:
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein
OhbB - Pseudomonas aeruginosa
Length = 428
Score = 35.1 bits (77), Expect = 0.46
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +3
Query: 24 CLFAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIR 203
CL A L+ DE A + A+H YN DS+V +S+ + DN ++ ++ NL+
Sbjct: 243 CLLATELHTDEEAAEHASQAQHAYNPEFTL-RDSSVVQSQREFDDNINLVVLSIFPNLVV 301
Query: 204 NNKMNCM 224
+ N +
Sbjct: 302 HQLGNAL 308
>UniRef50_Q8IAU8 Cluster: Putative uncharacterized protein
MAL8P1.104; n=2; Eukaryota|Rep: Putative uncharacterized
protein MAL8P1.104 - Plasmodium falciparum (isolate 3D7)
Length = 1774
Score = 32.7 bits (71), Expect = 2.5
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 120 DSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYAY 236
++ + +K IY+ N G LI N++NN + N +N Y Y
Sbjct: 707 ENMIGLNKNIYSTNNGPLIGNMINNNVYNANINYNNYNY 745
>UniRef50_Q91F68 Cluster: 458R; n=1; Invertebrate iridescent virus
6|Rep: 458R - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 495
Score = 32.3 bits (70), Expect = 3.3
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 60 TAFNEILAEHLYNDVIIADYDSAV-ERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYAY 236
T F +L E ND++ + + + ER KLI + K + I + +L NNK + Y Y
Sbjct: 297 TMFKGVLEEGCKNDILKNNTNETLFERKKLIVREGKKDPIMSTNGDLYLNNKNQTLWYNY 356
Query: 237 Q 239
+
Sbjct: 357 K 357
>UniRef50_Q81JK0 Cluster: Membrane protein, putative; n=5; Bacillus
cereus group|Rep: Membrane protein, putative - Bacillus
anthracis
Length = 343
Score = 32.3 bits (70), Expect = 3.3
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +3
Query: 171 LITNVVNNLIRNNKMNCMEYAYQLWMQGS--EDIVRDCFPVEFT--LILAENYV-KLMYR 335
LIT ++ ++N K +EY LW+ S ++V+ +P+ F L NYV +
Sbjct: 136 LITPLLKVFVKNAKKREIEYFLILWLYASVVVNLVKYYYPINFNIELFYVTNYVGYFLLG 195
Query: 336 ARRSRFYIERQWR 374
S F I ++WR
Sbjct: 196 YYLSNFDISKKWR 208
>UniRef50_A5KJ50 Cluster: Sensor protein; n=1; Ruminococcus torques
ATCC 27756|Rep: Sensor protein - Ruminococcus torques
ATCC 27756
Length = 408
Score = 32.3 bits (70), Expect = 3.3
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 147 IYTDNKGELITNVVNNLIRNNKMNCMEYAYQLWMQGSE 260
+ D KGE+I + ++ + N +EYA ++W +G E
Sbjct: 82 VLLDEKGEVILTDTSKIVSIDTENAIEYASEVWARGKE 119
>UniRef50_Q54R27 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1525
Score = 31.9 bits (69), Expect = 4.3
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +3
Query: 84 EHLYNDVIIADYDSAVERSKLI--YTDNKGELITNVVNNLIRNNKMNCMEYAY 236
E+++ND I + +E+ +LI Y N+ ++ + + N IRNN ++ ++Y Y
Sbjct: 1434 ENIFNDPFI---EGNIEQCELILKYYPNRFKITQSAITNTIRNNNIHIIKYYY 1483
>UniRef50_Q1UZN8 Cluster: DNA processing chain A; n=1; Candidatus
Pelagibacter ubique HTCC1002|Rep: DNA processing chain A
- Candidatus Pelagibacter ubique HTCC1002
Length = 306
Score = 31.5 bits (68), Expect = 5.7
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 84 EHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYAYQLWMQGSED 263
E +Y D I ++ D + IY + + I + L NK+ E+ QL++ D
Sbjct: 65 EQIYQDSI-SELDKMKSSNIKIYNIFENDEIGLFKDGLFSKNKIPTDEFPNQLFLINKSD 123
Query: 264 IVRDCFPVEFTLILAEN 314
+V D F FT+I N
Sbjct: 124 LVIDSFKNIFTIIGTRN 140
>UniRef50_Q7RPU6 Cluster: Putative uncharacterized protein PY01359;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01359 - Plasmodium yoelii yoelii
Length = 1191
Score = 31.5 bits (68), Expect = 5.7
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 69 NEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMN 218
NEI++ + D+I S + S+ IY K N + NLI+ NK+N
Sbjct: 840 NEIVSSSINGDLIFFKNVSEKKVSENIYEKKKNIYYENCLENLIKENKIN 889
>UniRef50_Q9KS92 Cluster: GGDEF family protein; n=16; Vibrio
cholerae|Rep: GGDEF family protein - Vibrio cholerae
Length = 667
Score = 31.1 bits (67), Expect = 7.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 170 AHHKCRKQSDTKQQDELHGV 229
AH++ RK+ D QQD LHGV
Sbjct: 484 AHYRRRKECDQNQQDSLHGV 503
>UniRef50_Q9EU62 Cluster: VapG protein; n=1; Rhodococcus equi|Rep:
VapG protein - Corynebacterium equii (Rhodococcus equi)
Length = 172
Score = 31.1 bits (67), Expect = 7.5
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 54 EGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLI 200
EGT F E L +HLY+D + +Y++ + + D+ G L+ +V + I
Sbjct: 111 EGTLFTEDL-QHLYSDTVSFEYNAVGPYLNINFFDSHGTLLGHVQSGSI 158
>UniRef50_A5ZET2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 400
Score = 31.1 bits (67), Expect = 7.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 42 LYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKG 167
LY DEG FN + + L N +V + LI +DNKG
Sbjct: 51 LYVDEGNIFNLVARDTLLNGKFSFRDTVSVTKKMLIMSDNKG 92
>UniRef50_A7EW00 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 589
Score = 31.1 bits (67), Expect = 7.5
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 87 HLYNDVIIADYDSAVERSKLIYTDNKGELITNVVNNLIR--NNKMNCMEYAYQLW 245
H Y++ ++DYD A E K + T+ + + + NL+R + K+ + Y QLW
Sbjct: 469 HFYHEGKLSDYDQARELYKRVMTETQRDHLHQNTANLLRFVDAKVIKVGYLAQLW 523
>UniRef50_Q4FM63 Cluster: Outer membrane protein omp1; n=2;
Candidatus Pelagibacter ubique|Rep: Outer membrane
protein omp1 - Pelagibacter ubique
Length = 745
Score = 30.7 bits (66), Expect = 9.9
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 39 SLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGELITNV 185
+L DEG AFNE+L N++ ++ VE ++++ DN+ + I N+
Sbjct: 364 NLLVDEGDAFNELLQTRTLNNLRGLNFFRKVE-TEILDIDNENKKIINI 411
>UniRef50_Q9XZX4 Cluster: Putative uncharacterized protein L2743.06;
n=3; Leishmania|Rep: Putative uncharacterized protein
L2743.06 - Leishmania major
Length = 1452
Score = 30.7 bits (66), Expect = 9.9
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 226 STPTSSGCKAPRTSSGIVSRLSSHLS*LKTMLSLCT--GRDGLAFTLSDNGG 375
S S+G APR+SSG +R+S + S C GR GLA + GG
Sbjct: 790 SASASTGAAAPRSSSGTGARVSDRSASTTPEPSCCAQCGRQGLAKPVKCPGG 841
>UniRef50_Q7RJ40 Cluster: Putative uncharacterized protein PY03424;
n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03424 - Plasmodium yoelii yoelii
Length = 1856
Score = 30.7 bits (66), Expect = 9.9
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 30 FAASLYADEGTAFNEILAEHLYNDVIIADYDSAVERSKLIYTDNKGEL-ITNVVNNLIRN 206
FA + + T FNE + + +D I D + S LI TDN + N V N++ N
Sbjct: 1452 FAVKEHISKNTQFNEQDQQEIGDDQNILSNDKNGQFSALIETDNDADYRYKNYVFNMLSN 1511
Query: 207 NKMNCMEYAYQLWMQGSEDIVRD 275
+ + Y + + S DIV +
Sbjct: 1512 INLRKLVYGHNRDLY-SFDIVNE 1533
>UniRef50_Q6FJX3 Cluster: Candida glabrata strain CBS138 chromosome
M complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 600
Score = 30.7 bits (66), Expect = 9.9
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 39 SLYADEGTAFNEILAEHLYNDVIIADYDSAV----ERSKLIYTDNKGELIT 179
S+Y E +A+HLY DV +AD D + S + DNK L T
Sbjct: 333 SIYTTHDLKQREEIAKHLYEDVSLADLDGTIADTTTESGQMMVDNKKHLST 383
>UniRef50_Q8TQ35 Cluster: Cell surface protein; n=1; Methanosarcina
acetivorans|Rep: Cell surface protein - Methanosarcina
acetivorans
Length = 394
Score = 30.7 bits (66), Expect = 9.9
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +3
Query: 102 VIIADYDSAVERSKLIYTDNKGELITNVVNNLIRNNKMNCMEYAYQLWMQGSEDIVRD 275
+ + + D+ + + + +N+G L+ + NNL+ NN + A +W + +IVR+
Sbjct: 155 IYVDNTDNTIINNNIFLGNNRGILLNSSSNNLLENNTAIDNDGAISIWDFSNFNIVRN 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,146,532
Number of Sequences: 1657284
Number of extensions: 5951721
Number of successful extensions: 18608
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18591
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15293670012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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