Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F04f
         (359 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121626-1|AAM51953.1|  605|Drosophila melanogaster GH20068p pro...    27   5.4  
AE013599-2758|AAF57644.2|  605|Drosophila melanogaster CG33147-P...    27   5.4  
AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P...    27   9.5  

>AY121626-1|AAM51953.1|  605|Drosophila melanogaster GH20068p
           protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 181 HGQRCPSSTRGRKDQHSDPGV 119
           +G RC   T+GRK  H DP V
Sbjct: 557 NGDRCLRETKGRKHPHVDPVV 577


>AE013599-2758|AAF57644.2|  605|Drosophila melanogaster CG33147-PA
           protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 181 HGQRCPSSTRGRKDQHSDPGV 119
           +G RC   T+GRK  H DP V
Sbjct: 557 NGDRCLRETKGRKHPHVDPVV 577


>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
           protein.
          Length = 1943

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = -3

Query: 159 QPVAVKISIVTQVSAALLNG----FTGFRVAQNRGNHEKNC 49
           QP +++   + QV+A+LL      +   R  Q R NH  NC
Sbjct: 466 QPSSLEFEALEQVAASLLKERPRIYQSRRQQQKRNNHHSNC 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,280,297
Number of Sequences: 53049
Number of extensions: 193266
Number of successful extensions: 894
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)