Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F03f
         (408 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical pr...    26   9.1  
AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin...    26   9.1  

>Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical
           protein F07A5.3 protein.
          Length = 590

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -2

Query: 284 ITILKNKRKGKSNSITPL*IYVLDI**FWVHYNNKNNYLHWI 159
           +T+L    KG   SI P+ I  +    ++  YNN  +  +WI
Sbjct: 210 VTVLSGIFKGDGGSIVPIPIPAMPKFGYFQGYNNSRDEEYWI 251


>AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin
           protein 74 protein.
          Length = 467

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
 Frame = -2

Query: 380 HASYLLALTSRHYVTDNN-RDVAL 312
           HASYLL+L+ + +V  NN +DV L
Sbjct: 371 HASYLLSLSIQSHVPTNNVKDVEL 394


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,656,348
Number of Sequences: 27780
Number of extensions: 151304
Number of successful extensions: 254
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)