Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E11f
         (353 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3V0Z8 Cluster: Putative uncharacterized protein; n=2; ...    38   0.037
UniRef50_A1CSB6 Cluster: Alcohol dehydrogenase, putative; n=3; T...    31   7.5  

>UniRef50_A3V0Z8 Cluster: Putative uncharacterized protein; n=2;
           Rhodobacteraceae|Rep: Putative uncharacterized protein -
           Loktanella vestfoldensis SKA53
          Length = 109

 Score = 38.3 bits (85), Expect = 0.037
 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = -2

Query: 289 NSRIIVLRKSQL--RVFHTML*KRIHTVRYKMSLLCWFMTHSDAITELHLLKLIDKHRR 119
           N  I + R   L  RV H    + +HT +YK+  L WF TH D  T L   + I + RR
Sbjct: 28  NGAIYIGRTRDLHSRVQHHRDGRSVHTAKYKIKTLVWFETHDDFDTSLRRERAIKRWRR 86


>UniRef50_A1CSB6 Cluster: Alcohol dehydrogenase, putative; n=3;
           Trichocomaceae|Rep: Alcohol dehydrogenase, putative -
           Aspergillus clavatus
          Length = 346

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 299 RVGFGWGRKECVDCAIXI 352
           +VGFGWG K C DC   I
Sbjct: 78  KVGFGWGHKVCGDCDFCI 95


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,225,148
Number of Sequences: 1657284
Number of extensions: 5309012
Number of successful extensions: 9500
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9493
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)