Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E11f
         (353 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039719-1|AAH39719.1|  269|Homo sapiens chromosome 1 open readi...    28   7.2  
AL022398-5|CAI95691.1|  269|Homo sapiens chromosome 1 open readi...    28   7.2  
AK057807-1|BAB71584.1|  269|Homo sapiens protein ( Homo sapiens ...    28   7.2  

>BC039719-1|AAH39719.1|  269|Homo sapiens chromosome 1 open reading
           frame 74 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 125 PTPF*FHVN*NNSNCIALITLK 60
           P P+ FH+N  + NC+AL  L+
Sbjct: 180 PVPYTFHLNQGDDNCLALTPLR 201


>AL022398-5|CAI95691.1|  269|Homo sapiens chromosome 1 open reading
           frame 74 protein.
          Length = 269

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 125 PTPF*FHVN*NNSNCIALITLK 60
           P P+ FH+N  + NC+AL  L+
Sbjct: 180 PVPYTFHLNQGDDNCLALTPLR 201


>AK057807-1|BAB71584.1|  269|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25078 fis, clone CBL06954. ).
          Length = 269

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 125 PTPF*FHVN*NNSNCIALITLK 60
           P P+ FH+N  + NC+AL  L+
Sbjct: 180 PVPYTFHLNQGDDNCLALTPLR 201


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,915,255
Number of Sequences: 237096
Number of extensions: 822019
Number of successful extensions: 1186
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)