Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E10f
         (360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   1.1  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   4.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   4.6  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   6.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 229 MFSTCEQTVLTAASSFLDPN 170
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 247 LVTPLIMFSTCEQTVLTAASSFLDPNHFST 158
           LVTP ++ + C+   L    SFL   H  T
Sbjct: 12  LVTPNLIVAECDTKGLIVEKSFLQSVHDCT 41


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 232 IMFSTCEQTVLTAASSFLDPN 170
           IM +TC++T+    +S  DP+
Sbjct: 263 IMLATCDKTMQRVTTSHSDPH 283


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 139 TMRMSTAKCLKFLLRTPRGPLTVTRR 62
           T  + TAK L  L+R   GP    RR
Sbjct: 773 TKALRTAKALGCLMRNHSGPKCAKRR 798


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 29  NPRRAYGPCEIASGD 73
           +PR AYGP  +  GD
Sbjct: 714 HPRTAYGPTYLLIGD 728


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 29  NPRRAYGPCEIASGD 73
           +PR AYGP  +  GD
Sbjct: 715 HPRTAYGPTYLLIGD 729


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,363
Number of Sequences: 2352
Number of extensions: 8179
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)