Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E09f
         (428 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88165-6|AAK21396.2|  214|Caenorhabditis elegans Hypothetical pr...    32   0.15 
Z81557-12|CAB04532.2|  277|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z77661-1|CAB01186.1|  341|Caenorhabditis elegans Hypothetical pr...    27   4.3  
AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical ...    27   5.7  
AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical ...    27   5.7  
AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine re...    27   7.5  
Z92781-3|CAB07182.1|  326|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>U88165-6|AAK21396.2|  214|Caenorhabditis elegans Hypothetical
           protein F54C1.8 protein.
          Length = 214

 Score = 32.3 bits (70), Expect = 0.15
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 183 MQEDEKNTKNKLSQHENENAKQIDVVDDAEAG 88
           M++D  ++ NK ++HEN N   +++VD+   G
Sbjct: 7   MKKDSNSSSNKETKHENSNVSVLEIVDEHNIG 38


>Z81557-12|CAB04532.2|  277|Caenorhabditis elegans Hypothetical
           protein F59A1.8 protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 203 NYTVLFLCRKMKKTQKINYRSTKMKMPSKLMWSMML 96
           N T+L++C K K+  +  YR  ++K+  K  + + L
Sbjct: 46  NETILYICTKYKEKTENKYRDMELKIDGKQHFQLAL 81


>Z77661-1|CAB01186.1|  341|Caenorhabditis elegans Hypothetical
           protein F40G12.1 protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +1

Query: 58  DVILKILIQYPSFSIIDHINLLGIFIFVLR*FIFCVFFIFLH 183
           D++LKI + +  FS I+ + L  +FIF+ R   F + F+F++
Sbjct: 30  DLLLKIEVGFLVFSWIEFLYLFYLFIFI-RSMHFNLTFLFMN 70


>AF022975-3|AAB70674.1|  548|Caenorhabditis elegans Hypothetical
           protein K09C6.8 protein.
          Length = 548

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 HQFAWHFHFRAAI 149
           HQ  +HFHFRAAI
Sbjct: 97  HQTIYHFHFRAAI 109


>AF022975-1|AAB70675.3|  587|Caenorhabditis elegans Hypothetical
           protein K09C6.7 protein.
          Length = 587

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +3

Query: 111 HQFAWHFHFRAAI 149
           HQ  +HFHFRAAI
Sbjct: 282 HQTIYHFHFRAAI 294


>AF125459-9|AAD12845.2|  328|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 22 protein.
          Length = 328

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 337 PTQFTDTKDPKVYCITYIYLCN*SRVVIKVELESMII 227
           P  FT  +DP V    +IY+   S +V+   L S+II
Sbjct: 14  PLPFTCKEDPDVAYSIFIYIFQASYLVLGATLNSLII 50


>Z92781-3|CAB07182.1|  326|Caenorhabditis elegans Hypothetical
           protein F09C3.4 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -1

Query: 224 ILNHLPTNYTVLFLCRKMKKTQKINYR 144
           ++NH+   +T+  LC+ M K Q + ++
Sbjct: 237 LINHISHFHTIQLLCQSMSKLQMLKWK 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,485,992
Number of Sequences: 27780
Number of extensions: 184319
Number of successful extensions: 592
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)