Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E07f
         (447 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1574 + 38337669-38338196                                         32   0.24 
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703...    28   3.0  
04_04_1447 + 33675146-33675922                                         27   9.1  
04_04_0071 - 22513684-22513697,22514052-22514328,22514417-225146...    27   9.1  

>01_06_1574 + 38337669-38338196
          Length = 175

 Score = 31.9 bits (69), Expect = 0.24
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = -1

Query: 288 AESVCHVSLYHLRNWRINSPGARSSRGANYGLISRCLCHFC 166
           A S+C    YH+R  R     +   +G  Y     CLC  C
Sbjct: 37  AHSLCPYKFYHIRCLRYEQIASSEQQGNEYWYCPSCLCRVC 77


>07_03_1555 -
           27669981-27670148,27670232-27670315,27670349-27670360,
           27670683-27670761,27670840-27671078,27671167-27671260,
           27671342-27671484,27671688-27671786,27671870-27671998,
           27672123-27672197,27672308-27672520,27672581-27672676,
           27673282-27673380,27673600-27673839,27674212-27674322,
           27674429-27674626,27674720-27674835,27675076-27675193,
           27675761-27675866,27675972-27676030,27676259-27676388,
           27676730-27676887,27677672-27677887,27677972-27678082,
           27678313-27678472,27679364-27679509,27679603-27679695,
           27680610-27680706,27681224-27681294,27681407-27681505,
           27682037-27682168,27682287-27682729,27683252-27683564,
           27684301-27684549
          Length = 1631

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -1

Query: 396 YKNLLRVGINASASVNVRVHFCIVFGNSACGVG*ANAESVC-HVSLYHLRNWRINS 232
           +++L++ G+  SAS+      C      AC +G   A ++C +++L   R WR+++
Sbjct: 727 HQHLIQNGLRMSASIVADTAQCFSTHQFACLIG-YGASAICPYLALETCRQWRLSN 781


>04_04_1447 + 33675146-33675922
          Length = 258

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 198 GLISRCLCHFCGSRRFCCFGSLCRRLSGI 112
           G ISR  C+ CG+  +   GS CRR   +
Sbjct: 82  GDISRAACYDCGTSVWRDAGSACRRAKDV 110


>04_04_0071 -
           22513684-22513697,22514052-22514328,22514417-22514659,
           22515119-22515157
          Length = 190

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 156 RFCCFGSLCRRLSG 115
           RFCCFG+ C   SG
Sbjct: 3   RFCCFGAGCSEFSG 16


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,509,418
Number of Sequences: 37544
Number of extensions: 183330
Number of successful extensions: 490
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)