Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E07f
         (447 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical p...    28   2.7  
U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical...    27   6.2  
AC006675-11|AAK84552.1|  326|Caenorhabditis elegans Serpentine r...    27   6.2  

>Z68131-1|CAA92217.1|  467|Caenorhabditis elegans Hypothetical
           protein B0395.2 protein.
          Length = 467

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 184 SGNKPIICAPTTPCAWTVYSPVSKMIQTNMTNRFCICSADTTCAITEDDTEVHAYI 351
           + N P + A  T  A   Y P+  + ++++    C CS   TC  T    +VH++I
Sbjct: 134 ASNLPFVTAYVTYLAAFFYFPLKFLYESDLK---CACSFIITCETTRIAMKVHSFI 186


>U23450-5|AAK31466.3|  706|Caenorhabditis elegans Hypothetical
           protein C30B5.1 protein.
          Length = 706

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 281 DSAFAQPTPHALLPKTIQKCTRTFTDALALIPTRSKFLYADNLLH 415
           D +  +  P   LPKTI + TRT +D+L     RS+    D L H
Sbjct: 397 DMSETEERPRPKLPKTIYQNTRTHSDSLT---ERSRHFTYDELKH 438


>Z81527-12|CAB04277.2|  487|Caenorhabditis elegans Hypothetical
           protein F35E12.10 protein.
          Length = 487

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 405 LSAYKNLLRVGINASASVNVRVHFCIVFGNSACGVG 298
           +S+  N ++VG+ AS++  VRV F     NSA  +G
Sbjct: 439 VSSNGNYMKVGLTASSNTEVRVAFEFKKYNSATSIG 474


>U00065-1|AAK68287.1|  400|Caenorhabditis elegans Hypothetical
           protein D1044.7 protein.
          Length = 400

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = +1

Query: 190 NKPIICAPTTPCA-WTVYSPVSKM--IQTNMTNRFCICSADTTCAITEDDTEVHA 345
           N+P+ C P  PC+ ++V +    +    +N  N  C  S +T C  T    +V A
Sbjct: 33  NQPLTCTPQDPCSCFSVSARYGAICHYSSNYNNYLCCHSQNTQCG-TNSSPQVSA 86


>AL132860-20|CAB60503.2|  263|Caenorhabditis elegans Hypothetical
           protein Y56A3A.22 protein.
          Length = 263

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +2

Query: 314 LLPKTIQKCTRTFTDALALIPTRSKFLYADNLLH 415
           LL ++I +C+R+   A    P+ S+FL+    LH
Sbjct: 2   LLARSIIRCSRSICCAQFQTPSSSRFLHTSRQLH 35


>AC006675-11|AAK84552.1|  326|Caenorhabditis elegans Serpentine
           receptor, class t protein31 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 6.2
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 428 LFYSGAISCQHTKTYYESGSMRVHL*MYAC 339
           L Y GA+ C H    Y SGS+ + L   +C
Sbjct: 94  LSYQGAVYCSHPTLIYVSGSIGLGLWASSC 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,048,813
Number of Sequences: 27780
Number of extensions: 162600
Number of successful extensions: 471
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 777938954
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)