Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E05f
         (396 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5DF3 Cluster: PREDICTED: similar to microfibri...    53   2e-06
UniRef50_UPI0000D555CE Cluster: PREDICTED: similar to CG4621-PA;...    49   4e-05
UniRef50_Q9VKM6 Cluster: Vacuolar protein sorting-associated pro...    39   0.040
UniRef50_UPI0000DB7291 Cluster: PREDICTED: similar to YL-1 CG462...    38   0.093
UniRef50_Q8T5I1 Cluster: Transcription factor; n=3; Culicidae|Re...    38   0.093

>UniRef50_UPI00015B5DF3 Cluster: PREDICTED: similar to
           microfibrillar-associated protein, putative; n=1;
           Nasonia vitripennis|Rep: PREDICTED: similar to
           microfibrillar-associated protein, putative - Nasonia
           vitripennis
          Length = 390

 Score = 53.2 bits (122), Expect = 2e-06
 Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
 Frame = +2

Query: 2   DENDEPVSDQEVEEKAKRK-VGTKAYXXXXXXXXXXXXXXXXXXXXXXXXXXEDKVEKQN 178
           DENDEPVSD E EEK ++K V TKAY                          E  V K+ 
Sbjct: 61  DENDEPVSDHEPEEKKRKKGVFTKAY--------------KEPAKPSSSKPKEAAVPKRK 106

Query: 179 KSAVDKI--VDTSIERKSIRQSTAMKSAETIQRIKIRS 286
           +S + KI  +    ERKSIR+STA KSA T++R++ R+
Sbjct: 107 RSRIQKIERIFIDTERKSIRRSTAAKSAATLKRLEKRN 144


>UniRef50_UPI0000D555CE Cluster: PREDICTED: similar to CG4621-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG4621-PA - Tribolium castaneum
          Length = 348

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   DENDEPVSDQEVE-EKAKRKVGTKAYXXXXXXXXXXXXXXXXXXXXXXXXXXEDKVEKQN 178
           DENDEP+SD E E +K KR++ TKAY                            KV    
Sbjct: 62  DENDEPISDNEEEGQKKKRRLVTKAYKEPVPAPSKQKAKPKPTKPV-------PKVRTTQ 114

Query: 179 KSAVDKIVDTSIERKSIRQSTAMKSAETIQRIKIRS 286
             + +  +  + +RKSIR+STA KSA T QRIK+R+
Sbjct: 115 HESTEYGLKIT-KRKSIRKSTAAKSAATAQRIKVRN 149


>UniRef50_Q9VKM6 Cluster: Vacuolar protein sorting-associated
           protein 72 homolog; n=1; Drosophila melanogaster|Rep:
           Vacuolar protein sorting-associated protein 72 homolog -
           Drosophila melanogaster (Fruit fly)
          Length = 351

 Score = 38.7 bits (86), Expect = 0.040
 Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
 Frame = +2

Query: 2   DENDEPVSDQEVEEKAKRK---VGTKAYXXXXXXXXXXXXXXXXXXXXXXXXXXEDKVEK 172
           DENDEPVSDQE   + KRK   V TKAY                             V K
Sbjct: 61  DENDEPVSDQEEAPEKKRKRGVVNTKAYKETKPAVKKETKATPALHKKRPGGG----VTK 116

Query: 173 QNKSAVDKIVDTSIERKSIRQSTAMKSAETIQRIK 277
           +       ++D+   RKSIR STA+K+  T  R+K
Sbjct: 117 RRPRPRFTVLDSG--RKSIRTSTAIKTQATKIRLK 149


>UniRef50_UPI0000DB7291 Cluster: PREDICTED: similar to YL-1
           CG4621-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
           to YL-1 CG4621-PA - Apis mellifera
          Length = 301

 Score = 37.5 bits (83), Expect = 0.093
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   DENDEPVSDQEVE-EKAKRKVGTKAYXXXXXXXXXXXXXXXXXXXXXXXXXXEDKVEKQN 178
           DENDEP+SD E E  K KR++ TKAY                          E KV +  
Sbjct: 61  DENDEPISDTEQEGPKKKRRLVTKAY--------------KEPKVQSQLPSKEKKVRQPR 106

Query: 179 KSAVDKIVDTSIERKSIRQSTAMKSAETIQRIKIRS 286
           +   ++      +RKSIR+STA KSA T +R+  R+
Sbjct: 107 QRIFNE------KRKSIRRSTAAKSAATQKRLSERN 136


>UniRef50_Q8T5I1 Cluster: Transcription factor; n=3; Culicidae|Rep:
           Transcription factor - Anopheles gambiae (African
           malaria mosquito)
          Length = 391

 Score = 37.5 bits (83), Expect = 0.093
 Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
 Frame = +2

Query: 2   DENDEPVSDQEVEEKAK----RKVG--TKAYXXXXXXXXXXXXXXXXXXXXXXXXXXEDK 163
           DENDEP+SD E EE AK    RKVG  TKAY                          +  
Sbjct: 62  DENDEPISDAE-EEPAKGSKRRKVGTVTKAY----REPAPKKQAPAKAKEPKAKAERQST 116

Query: 164 VEKQNKSAVDKIVDTSIERKSIRQSTAMKSAETIQRIKIR 283
           + K+ K  V   +D+   RKS R+STA K+A T  R+K R
Sbjct: 117 LRKRPKFTV---IDSG--RKSFRKSTAAKTAATQSRLKQR 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,617,632
Number of Sequences: 1657284
Number of extensions: 1981253
Number of successful extensions: 6731
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6728
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)