Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301E04f
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    20   8.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    20   8.2  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    20   8.2  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 316 YFFSQPHSKKKY 351
           YFF  PH  K Y
Sbjct: 345 YFFCSPHPHKVY 356


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 186 LWGSVLATSSRCPALWS*W 130
           L+G + A  S+C   W+ W
Sbjct: 98  LYG-IFADESKCDVFWNCW 115


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 186 LWGSVLATSSRCPALWS*W 130
           L+G + A  S+C   W+ W
Sbjct: 98  LYG-IFADESKCDVFWNCW 115


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 ELGTVMRSLGQNPTEAELQDM 206
           E+ TV+  L + PT   LQ+M
Sbjct: 42  EMVTVLGDLHRKPTYNNLQEM 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,712
Number of Sequences: 336
Number of extensions: 1832
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)